RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 DDX46Q7L014 1031 aaKnown RBP14.23□□□□□ -0.13
SLX4-201ENST00000294008 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
SLX4-201ENST00000294008 KIF4AO95239 1232 aa14.23□□□□□ -0.13
SLX4-201ENST00000294008 MAK16Q9BXY0 300 aaKnown RBP14.23□□□□□ -0.13
SLX4-201ENST00000294008 STK25O00506 426 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 RRS1Q15050 365 aaKnown RBP14.22□□□□□ -0.13
SLX4-201ENST00000294008 TTF1Q15361 905 aaPredicted RBP14.22□□□□□ -0.13
SLX4-201ENST00000294008 HDAC9Q9UKV0 1011 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 AKAP2Q9Y2D5 859 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 C8orf76Q96K31 380 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 SELENOSQ9BQE4 189 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 IFIT5Q13325 482 aaKnown RBP14.22□□□□□ -0.13
SLX4-201ENST00000294008 MRRFQ96E11 262 aaKnown RBP14.22□□□□□ -0.13
SLX4-201ENST00000294008 ZNF213O14771 459 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 ACRBPQ8NEB7 543 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 SFPQP23246 707 aaKnown RBP eCLIP14.22□□□□□ -0.13
SLX4-201ENST00000294008 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 PDZRN3Q9UPQ7 1066 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 TACC3Q9Y6A5 838 aa14.22□□□□□ -0.13
SLX4-201ENST00000294008 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
SLX4-201ENST00000294008 CCT4P50991 539 aaKnown RBP14.22□□□□□ -0.13
SLX4-201ENST00000294008 USHBP1Q8N6Y0 703 aa14.21□□□□□ -0.13
SLX4-201ENST00000294008 PRAM1Q96QH2 718 aa14.21□□□□□ -0.13
SLX4-201ENST00000294008 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
SLX4-201ENST00000294008 SMARCC1Q92922 1105 aaPredicted RBP14.21□□□□□ -0.13
SLX4-201ENST00000294008 TTLL3Q9Y4R7 772 aa14.21□□□□□ -0.13
SLX4-201ENST00000294008 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.21□□□□□ -0.13
SLX4-201ENST00000294008 PPANQ9NQ55 473 aaKnown RBP14.21□□□□□ -0.13
SLX4-201ENST00000294008 SPDYE16A6NNV3 312 aaPredicted RBP14.21□□□□□ -0.14
SLX4-201ENST00000294008 AMPD3Q01432 767 aa14.21□□□□□ -0.14
SLX4-201ENST00000294008 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.14
SLX4-201ENST00000294008 C4orf50Q6ZRC1 276 aa14.21□□□□□ -0.14
SLX4-201ENST00000294008 ZSCAN12O43309 604 aa14.21□□□□□ -0.14
SLX4-201ENST00000294008 PTPN14Q15678 1187 aa14.21□□□□□ -0.14
SLX4-201ENST00000294008 MAP3K11Q16584 847 aa14.21□□□□□ -0.14
SLX4-201ENST00000294008 TRIM6Q9C030 488 aaPredicted RBP14.21□□□□□ -0.14
SLX4-201ENST00000294008 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.14
SLX4-201ENST00000294008 WDR46O15213 610 aaKnown RBP14.2□□□□□ -0.14
SLX4-201ENST00000294008 PRPF40BQ6NWY9 871 aaKnown RBP14.2□□□□□ -0.14
SLX4-201ENST00000294008 KIFC2Q96AC6 838 aa14.2□□□□□ -0.14
SLX4-201ENST00000294008 GPHNQ9NQX3 736 aaPredicted RBP14.2□□□□□ -0.14
SLX4-201ENST00000294008 HYPKQ9NX55 129 aa14.2□□□□□ -0.14
SLX4-201ENST00000294008 STX8Q9UNK0 236 aa14.2□□□□□ -0.14
SLX4-201ENST00000294008 FMN1Q68DA7 1419 aa14.2□□□□□ -0.14
SLX4-201ENST00000294008 MCM10Q7L590 875 aa14.2□□□□□ -0.14
SLX4-201ENST00000294008 EXOC1Q9NV70 894 aa14.2□□□□□ -0.14
SLX4-201ENST00000294008 CCDC196A0A1B0GTZ2 297 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 PRKG1Q13976 671 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 CCDC25Q86WR0 208 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 PNISRQ8TF01 805 aaKnown RBP14.19□□□□□ -0.14
SLX4-201ENST00000294008 MCM3P25205 808 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 TSTA3Q13630 321 aaPredicted RBP14.19□□□□□ -0.14
SLX4-201ENST00000294008 TTC30BQ8N4P2 665 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 CCDC114Q96M63 670 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 CKAP4Q07065 602 aaKnown RBP14.19□□□□□ -0.14
SLX4-201ENST00000294008 LRRC43Q8N309 656 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 DAPK3O43293 454 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 POLD1P28340 1107 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 KRT9P35527 623 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
SLX4-201ENST00000294008 HSP90AA4PQ58FG1 418 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 CHMP6Q96FZ7 201 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 HSF2BPO75031 334 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 RFC1P35251 1148 aaPredicted RBP14.19□□□□□ -0.14
SLX4-201ENST00000294008 WHAMMQ8TF30 809 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 ACSBG1Q96GR2 724 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
SLX4-201ENST00000294008 USP47Q96K76 1375 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 ABL1P00519 1130 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 KRT32Q14532 448 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 GTF2F1P35269 517 aaKnown RBP eCLIP14.18□□□□□ -0.14
SLX4-201ENST00000294008 CCDC8Q9H0W5 538 aaPredicted RBP14.18□□□□□ -0.14
SLX4-201ENST00000294008 BACH1O14867 736 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 TSPY3P0CV98 308 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 TSPY8P0CW00 308 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 HEATR3Q7Z4Q2 680 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 HSPA1LP34931 641 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 HAND2P61296 217 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 WDR63Q8IWG1 891 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 ITM2BQ9Y287 266 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 BAG3O95817 575 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 ATP6V1E1P36543 226 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 PPFIA1Q13136 1202 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 PDCL2Q8N4E4 241 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 SPATA17Q96L03 361 aa14.18□□□□□ -0.14
SLX4-201ENST00000294008 IQSEC3Q9UPP2 1182 aaPredicted RBP14.18□□□□□ -0.14
SLX4-201ENST00000294008 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 C11orf95C9JLR9 678 aaPredicted RBP14.17□□□□□ -0.14
SLX4-201ENST00000294008 E7EVH7 732 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 HMGB2P26583 209 aaKnown RBP14.17□□□□□ -0.14
SLX4-201ENST00000294008 CFAP70Q5T0N1 1121 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 CEP120Q8N960 986 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 SARNPP82979 210 aaKnown RBP14.17□□□□□ -0.14
SLX4-201ENST00000294008 TRIM47Q96LD4 638 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 CDK19Q9BWU1 502 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 SYCE3A1L190 88 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 PDIA4P13667 645 aaKnown RBP14.17□□□□□ -0.14
SLX4-201ENST00000294008 PDE1CQ14123 709 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms