RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 PLA2R1Q13018 1463 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 CAMK4Q16566 473 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 CLIP2Q9UDT6 1046 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 ZKSCAN5Q9Y2L8 839 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 HOXC9P31274 260 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 TAF3Q5VWG9 929 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 F13A1P00488 732 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 SPHKAPQ2M3C7 1700 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 ZSCAN12O43309 604 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 ERLIN1O75477 346 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 PTPN14Q15678 1187 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 STIM1Q13586 685 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 MTHFSDQ2M296 383 aaKnown RBP11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 USP48Q86UV5 1035 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 PI4KAP1Q8N8J0 262 aa11.58□□□□□ -0.56
PCYT1A-201ENST00000292823 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 DDX11Q96FC9 970 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 CCDC8Q9H0W5 538 aaPredicted RBP11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 CDR1P51861 262 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 NYXQ9GZU5 481 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 ERCC6L2Q5T890 1561 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 CHMLP26374 656 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 C8orf76Q96K31 380 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 PANK2Q9BZ23 570 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 SFPQP23246 707 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 KIF18AQ8NI77 898 aa11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 PHAXQ9H814 394 aaKnown RBP11.57□□□□□ -0.56
PCYT1A-201ENST00000292823 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 MADDQ8WXG6 1647 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 CHL1O00533 1208 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 HOXB7P09629 217 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 ZNF445P59923 1031 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 RAI14Q9P0K7 980 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 PAXBP1Q9Y5B6 917 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 OFD1O75665 1012 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 DDB1Q16531 1140 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 KSR2Q6VAB6 950 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 ZNHIT6Q9NWK9 470 aaKnown RBP11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 PTCD1O75127 700 aaKnown RBP11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 SPTY2D1Q68D10 685 aaPredicted RBP11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 CCDC171Q6TFL3 1326 aa11.56□□□□□ -0.56
PCYT1A-201ENST00000292823 CCDC196A0A1B0GTZ2 297 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 EIF3JO75822 258 aaKnown RBP11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 GCP02774 474 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 RTL1A6NKG5 1358 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 FAM200AQ8TCP9 573 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 AATKQ6ZMQ8 1374 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 CCDC150Q8NCX0 1101 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 PLEKHF1Q96S99 279 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 CLTCL1P53675 1640 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 MAP3K12Q12852 859 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 CCDC152Q4G0S7 254 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 UBAC1Q9BSL1 405 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 CHPF2Q9P2E5 772 aa11.55□□□□□ -0.56
PCYT1A-201ENST00000292823 TUBB4AP04350 444 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 UQCRFS1P1P0C7P4 283 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 FBLN1P23142 703 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 FILIP1Q7Z7B0 1213 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 ZC3H13Q5T200 1668 aaKnown RBP11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 TSHZ3Q63HK5 1081 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 MPNDQ8N594 471 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 CNPY2Q9Y2B0 182 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 RFC4P35249 363 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 IQCEQ6IPM2 695 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 GDPD2Q9HCC8 539 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 TDO2P48775 406 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 PRIM1P49642 420 aaKnown RBP11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 GSTO1P78417 241 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 IKQ13123 557 aaPredicted RBP11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 TNNT1P13805 278 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 FSIP1Q8NA03 581 aa11.54□□□□□ -0.56
PCYT1A-201ENST00000292823 LMTK2Q8IWU2 1503 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 GOLGA6L9A6NEM1 432 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 TERF1P54274 439 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 LEKR1Q6ZMV7 388 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 CCAR1Q8IX12 1150 aaKnown RBP11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 ZFYP08048 801 aaPredicted RBP11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 CHRNA2Q15822 529 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 DDX46Q7L014 1031 aaKnown RBP11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 GRM8O00222 908 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 ZNF213O14771 459 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 LUC7LQ9NQ29 371 aaKnown RBP11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 LDHCP07864 332 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms