RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 KLRG2A4D1S0 409 aaPredicted RBP34.33■■■■□ 3.09
SSU72-201ENST00000291386 ATP5J2-PTCD1G3V325 749 aa34.33■■■■□ 3.09
SSU72-201ENST00000291386 BRPF1P55201 1214 aaPredicted RBP34.33■■■■□ 3.09
SSU72-201ENST00000291386 ERFEQ4G0M1 354 aa34.32■■■■□ 3.08
SSU72-201ENST00000291386 NUTM1Q86Y26 1132 aa34.32■■■■□ 3.08
SSU72-201ENST00000291386 DNAAF4Q8WXU2 420 aa34.32■■■■□ 3.08
SSU72-201ENST00000291386 SLC10A5Q5PT55 438 aa34.31■■■■□ 3.08
SSU72-201ENST00000291386 CCDC191Q8NCU4 936 aa34.31■■■■□ 3.08
SSU72-201ENST00000291386 CHRNA5P30532 468 aa34.3■■■■□ 3.08
SSU72-201ENST00000291386 RARSP54136 660 aaKnown RBP34.3■■■■□ 3.08
SSU72-201ENST00000291386 NEXNQ0ZGT2 675 aa34.3■■■■□ 3.08
SSU72-201ENST00000291386 ABCC12Q96J65 1359 aa34.3■■■■□ 3.08
SSU72-201ENST00000291386 PTPRCP08575 1304 aa34.3■■■■□ 3.08
SSU72-201ENST00000291386 H0YIN7 160 aa34.29■■■■□ 3.08
SSU72-201ENST00000291386 C2CD5Q86YS7 1000 aa34.29■■■■□ 3.08
SSU72-201ENST00000291386 SMC4Q9NTJ3 1288 aa34.29■■■■□ 3.08
SSU72-201ENST00000291386 TRMT112Q9UI30 125 aaKnown RBP34.29■■■■□ 3.08
SSU72-201ENST00000291386 COL11A2P13942 1736 aaPredicted RBP34.28■■■■□ 3.08
SSU72-201ENST00000291386 IGKV5-2P06315 115 aa34.28■■■■□ 3.08
SSU72-201ENST00000291386 SH3TC1Q8TE82 1336 aa34.28■■■■□ 3.08
SSU72-201ENST00000291386 BCL2L13Q9BXK5 485 aa34.27■■■■□ 3.08
SSU72-201ENST00000291386 PIM2Q9P1W9 311 aa34.27■■■■□ 3.08
SSU72-201ENST00000291386 TNRC6CQ9HCJ0 1690 aaKnown RBP34.27■■■■□ 3.08
SSU72-201ENST00000291386 DCAF8L1A6NGE4 600 aa34.26■■■■□ 3.08
SSU72-201ENST00000291386 CWC25Q9NXE8 425 aaPredicted RBP34.26■■■■□ 3.08
SSU72-201ENST00000291386 SRGNP10124 158 aa34.25■■■■□ 3.07
SSU72-201ENST00000291386 LINS1Q8NG48 757 aa34.25■■■■□ 3.07
SSU72-201ENST00000291386 NEURL1BA8MQ27 555 aa34.24■■■■□ 3.07
SSU72-201ENST00000291386 ZBTB38Q8NAP3 1195 aaPredicted RBP34.24■■■■□ 3.07
SSU72-201ENST00000291386 F6X3S4 739 aa34.23■■■■□ 3.07
SSU72-201ENST00000291386 CRY2Q49AN0 593 aa34.23■■■■□ 3.07
SSU72-201ENST00000291386 PCCAP05165 728 aaPredicted RBP34.22■■■■□ 3.07
SSU72-201ENST00000291386 GPR162Q16538 588 aa34.22■■■■□ 3.07
SSU72-201ENST00000291386 STYK1Q6J9G0 422 aa34.22■■■■□ 3.07
SSU72-201ENST00000291386 MASTLQ96GX5 879 aa34.22■■■■□ 3.07
SSU72-201ENST00000291386 ARFGEF1Q9Y6D6 1849 aa34.22■■■■□ 3.07
SSU72-201ENST00000291386 DDX60Q8IY21 1712 aaKnown RBP34.21■■■■□ 3.07
SSU72-201ENST00000291386 YBX3P16989 372 aaKnown RBP eCLIP34.21■■■■□ 3.074e-8■■□□□ 12.1
SSU72-201ENST00000291386 CWF19L2Q2TBE0 894 aaKnown RBP34.21■■■■□ 3.07
SSU72-201ENST00000291386 BEND3Q5T5X7 828 aa34.21■■■■□ 3.07
SSU72-201ENST00000291386 FAM89AQ96GI7 184 aa34.21■■■■□ 3.07
SSU72-201ENST00000291386 LAMB2P55268 1798 aa34.21■■■■□ 3.07
SSU72-201ENST00000291386 NPR1P16066 1061 aa34.2■■■■□ 3.07
SSU72-201ENST00000291386 SYNE4Q8N205 404 aa34.2■■■■□ 3.07
SSU72-201ENST00000291386 NLRP3Q96P20 1036 aa34.2■■■■□ 3.07
SSU72-201ENST00000291386 DALRD3Q5D0E6 543 aaKnown RBP34.19■■■■□ 3.06
SSU72-201ENST00000291386 PELP1Q8IZL8 1130 aaKnown RBP34.18■■■■□ 3.06
SSU72-201ENST00000291386 TTLL6Q8N841 843 aa34.18■■■■□ 3.06
SSU72-201ENST00000291386 GRIN3BO60391 1043 aa34.17■■■■□ 3.06
SSU72-201ENST00000291386 GCKRQ14397 625 aa34.17■■■■□ 3.06
SSU72-201ENST00000291386 CNKSR1Q969H4 720 aa34.17■■■■□ 3.06
SSU72-201ENST00000291386 ZNF622Q969S3 477 aaKnown RBP eCLIP34.17■■■■□ 3.06
SSU72-201ENST00000291386 KIF16BQ96L93 1317 aa34.17■■■■□ 3.06
SSU72-201ENST00000291386 CDHR2Q9BYE9 1310 aa34.17■■■■□ 3.06
SSU72-201ENST00000291386 NOB1Q9ULX3 412 aaKnown RBP34.17■■■■□ 3.06
SSU72-201ENST00000291386 HCLS1P14317 486 aaPredicted RBP34.16■■■■□ 3.06
SSU72-201ENST00000291386 HSP90B1P14625 803 aaKnown RBP34.16■■■■□ 3.06
SSU72-201ENST00000291386 ARHGAP45Q92619 1136 aa34.16■■■■□ 3.06
SSU72-201ENST00000291386 BCS1LQ9Y276 419 aa34.16■■■■□ 3.06
SSU72-201ENST00000291386 H7C1W4 665 aa34.15■■■■□ 3.06
SSU72-201ENST00000291386 IRS4O14654 1257 aaPredicted RBP34.15■■■■□ 3.06
SSU72-201ENST00000291386 ALDH1L1O75891 902 aa34.15■■■■□ 3.06
SSU72-201ENST00000291386 HOXA10P31260 410 aaPredicted RBP34.15■■■■□ 3.06
SSU72-201ENST00000291386 C3orf67Q6ZVT6 689 aa34.15■■■■□ 3.06
SSU72-201ENST00000291386 WWC3Q9ULE0 1092 aa34.15■■■■□ 3.06
SSU72-201ENST00000291386 API5Q9BZZ5 524 aaKnown RBP34.13■■■■□ 3.05
SSU72-201ENST00000291386 SRCIN1Q9C0H9 1055 aa34.13■■■■□ 3.05
SSU72-201ENST00000291386 BCAR3O75815 825 aa34.12■■■■□ 3.05
SSU72-201ENST00000291386 ALDH1B1P30837 517 aa34.12■■■■□ 3.05
SSU72-201ENST00000291386 RTL5Q5HYW3 569 aaPredicted RBP34.12■■■■□ 3.05
SSU72-201ENST00000291386 SLC4A10Q6U841 1118 aa34.12■■■■□ 3.05
SSU72-201ENST00000291386 SF3B3Q15393 1217 aaKnown RBP34.11■■■■□ 3.05
SSU72-201ENST00000291386 RPGRQ92834 1020 aaKnown RBP34.11■■■■□ 3.05
SSU72-201ENST00000291386 SLX4Q8IY92 1834 aa34.1■■■■□ 3.05
SSU72-201ENST00000291386 RBM17Q96I25 401 aaKnown RBP34.1■■■■□ 3.05
SSU72-201ENST00000291386 CRAMP1Q96RY5 1269 aa34.1■■■■□ 3.05
SSU72-201ENST00000291386 CACNA1SQ13698 1873 aa34.1■■■■□ 3.05
SSU72-201ENST00000291386 IPO8O15397 1037 aaKnown RBP34.09■■■■□ 3.05
SSU72-201ENST00000291386 CASP7P55210 303 aa34.09■■■■□ 3.05
SSU72-201ENST00000291386 YTHDC1Q96MU7 727 aaKnown RBP34.09■■■■□ 3.05
SSU72-201ENST00000291386 PDE8AO60658 829 aa34.08■■■■□ 3.05
SSU72-201ENST00000291386 PRPF40BQ6NWY9 871 aaKnown RBP34.07■■■■□ 3.04
SSU72-201ENST00000291386 JARID2Q92833 1246 aaPredicted RBP34.07■■■■□ 3.04
SSU72-201ENST00000291386 UBE3BQ7Z3V4 1068 aa34.06■■■■□ 3.04
SSU72-201ENST00000291386 PLA2G12BQ9BX93 195 aa34.06■■■■□ 3.04
SSU72-201ENST00000291386 MYH3P11055 1940 aa34.06■■■■□ 3.04
SSU72-201ENST00000291386 C7orf43Q8WVR3 580 aa34.04■■■■□ 3.04
SSU72-201ENST00000291386 GRM8O00222 908 aa34.03■■■■□ 3.04
SSU72-201ENST00000291386 CCT4P50991 539 aaKnown RBP34.03■■■■□ 3.04
SSU72-201ENST00000291386 ATF7IPQ6VMQ6 1270 aa34.03■■■■□ 3.04
SSU72-201ENST00000291386 UTYO14607 1347 aa34.03■■■■□ 3.04
SSU72-201ENST00000291386 DDX46Q7L014 1031 aaKnown RBP34.02■■■■□ 3.04
SSU72-201ENST00000291386 CHD4Q14839 1912 aa34.02■■■■□ 3.04
SSU72-201ENST00000291386 ABCC4O15439 1325 aa34.02■■■■□ 3.04
SSU72-201ENST00000291386 GOLGB1Q14789 3259 aaKnown RBP34.01■■■■□ 3.04
SSU72-201ENST00000291386 ZKSCAN2Q63HK3 967 aa34.01■■■■□ 3.03
SSU72-201ENST00000291386 FRAT1Q92837 279 aaPredicted RBP34.01■■■■□ 3.03
SSU72-201ENST00000291386 C9orf78Q9NZ63 289 aaPredicted RBP34.01■■■■□ 3.03
SSU72-201ENST00000291386 TRIM27P14373 513 aa34■■■■□ 3.03
SSU72-201ENST00000291386 SOGA3Q5TF21 947 aa34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 266.6 ms