RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PPFIA2O75334 1257 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-201ENST00000270722 PPP1R14CQ8TAE6 165 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 ANO10Q9NW15 660 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 PAXBP1Q9Y5B6 917 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 MAP3K11Q16584 847 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 TBC1D5Q92609 795 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 CCDC92Q53HC0 331 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-201ENST00000270722 LMNTD2Q8IXW0 634 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 CEP112Q8N8E3 955 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 SNX16P57768 344 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 NEMFO60524 1076 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
PRDM16-201ENST00000270722 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
PRDM16-201ENST00000270722 CCDC61Q9Y6R9 512 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 SLMAPQ14BN4 828 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-201ENST00000270722 TBCAO75347 108 aaKnown RBP15.14■□□□□ 0.01
PRDM16-201ENST00000270722 LMAN1P49257 510 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 TAF12Q16514 161 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 SPECC1Q5M775 1068 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 UBA5Q9GZZ9 404 aa15.14■□□□□ 0.01
PRDM16-201ENST00000270722 IQCGQ9H095 443 aaKnown RBP15.13■□□□□ 0.01
PRDM16-201ENST00000270722 RFX1P22670 979 aa15.13■□□□□ 0.01
PRDM16-201ENST00000270722 ATP6V1AP38606 617 aa15.13■□□□□ 0.01
PRDM16-201ENST00000270722 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
PRDM16-201ENST00000270722 VCXQ9H320 206 aa15.13■□□□□ 0.01
PRDM16-201ENST00000270722 FGD6Q6ZV73 1430 aa15.13■□□□□ 0.01
PRDM16-201ENST00000270722 RPUSD2Q8IZ73 545 aaKnown RBP15.13■□□□□ 0.01
PRDM16-201ENST00000270722 HDAC1Q13547 482 aaPredicted RBP15.12■□□□□ 0.01
PRDM16-201ENST00000270722 MAP7Q14244 749 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 GBP7Q8N8V2 638 aaPredicted RBP15.12■□□□□ 0.01
PRDM16-201ENST00000270722 TNPO1Q92973 898 aaKnown RBP15.12■□□□□ 0.01
PRDM16-201ENST00000270722 GNAQP50148 359 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
PRDM16-201ENST00000270722 SAMM50Q9Y512 469 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 NDC80O14777 642 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 EXOC5O00471 708 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 STMN4Q9H169 189 aaPredicted RBP15.12■□□□□ 0.01
PRDM16-201ENST00000270722 POLD1P28340 1107 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 C8orf76Q96K31 380 aa15.12■□□□□ 0.01
PRDM16-201ENST00000270722 GAS8O95995 478 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 A6NNZ2 444 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 TUBB8Q3ZCM7 444 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 VTI1AQ96AJ9 217 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 CCDC113Q9H0I3 377 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 GMNNO75496 209 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 BICDL1Q6ZP65 573 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 MINDY4BA8MYZ0 360 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 C6orf229H3BNL8 230 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 K7ELQ4 463 aaPredicted RBP15.11■□□□□ 0.01
PRDM16-201ENST00000270722 PPFIA3O75145 1194 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 RBM26Q5T8P6 1007 aaKnown RBP15.11■□□□□ 0.01
PRDM16-201ENST00000270722 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 POLE3Q9NRF9 147 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 RMND1Q9NWS8 449 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
PRDM16-201ENST00000270722 CA8P35219 290 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 NFE2L2Q16236 605 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 TMTC2Q8N394 836 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 PANK1Q8TE04 598 aa15.11■□□□□ 0.01
PRDM16-201ENST00000270722 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 FAM114A2Q9NRY5 505 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 JAKMIP1Q96N16 626 aaKnown RBP15.1■□□□□ 0.01
PRDM16-201ENST00000270722 ODF2LQ9ULJ1 636 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 PLCG2P16885 1265 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 CEP57Q86XR8 500 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 HOOK2Q96ED9 719 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 BICD1Q96G01 975 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 UBA7P41226 1012 aa15.1■□□□□ 0.01
PRDM16-201ENST00000270722 MVPQ14764 893 aaKnown RBP15.09■□□□□ 0.01
PRDM16-201ENST00000270722 FBF1Q8TES7 1133 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 KDM4AO75164 1064 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 GSDMDP57764 484 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 CLNS1AP54105 237 aaKnown RBP15.09■□□□□ 0.01
PRDM16-201ENST00000270722 ZNF213O14771 459 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 SSRP1Q08945 709 aaKnown RBP15.09■□□□□ 0.01
PRDM16-201ENST00000270722 JAKMIP2Q96AA8 810 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 RMDN2Q96LZ7 410 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
PRDM16-201ENST00000270722 KIF1CO43896 1103 aaKnown RBP15.09■□□□□ 0.01
PRDM16-201ENST00000270722 STK3Q13188 491 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 TMOD4Q9NZQ9 345 aa15.09■□□□□ 0.01
PRDM16-201ENST00000270722 RANBP6O60518 1105 aaKnown RBP15.08■□□□□ 0.01
PRDM16-201ENST00000270722 MAP4K4O95819 1239 aaPredicted RBP15.08■□□□□ 0.01
PRDM16-201ENST00000270722 CKAP4Q07065 602 aaKnown RBP15.08■□□□□ 0.01
PRDM16-201ENST00000270722 B4GALNT4Q76KP1 1039 aa15.08■□□□□ 0.01
PRDM16-201ENST00000270722 CADPS2Q86UW7 1296 aa15.08■□□□□ 0.01
PRDM16-201ENST00000270722 TTC14Q96N46 770 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms