RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
LAMA3-201ENST00000269217 SSR1P43307 286 aaKnown RBP11.78□□□□□ -0.52
LAMA3-201ENST00000269217 DUOX2Q9NRD8 1548 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 SNRPA1P09661 255 aaKnown RBP11.78□□□□□ -0.52
LAMA3-201ENST00000269217 SF3B2Q13435 895 aaKnown RBP11.78□□□□□ -0.52
LAMA3-201ENST00000269217 DYNC1I1O14576 645 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 TCP11L1Q9NUJ3 509 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 PAXBP1Q9Y5B6 917 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 MFSD6Q6ZSS7 791 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 PLCD4Q9BRC7 762 aa11.78□□□□□ -0.52
LAMA3-201ENST00000269217 MTIF2P46199 727 aaKnown RBP11.77□□□□□ -0.52
LAMA3-201ENST00000269217 TDRD12Q587J7 1177 aaKnown RBP11.77□□□□□ -0.52
LAMA3-201ENST00000269217 MICU3Q86XE3 530 aa11.77□□□□□ -0.52
LAMA3-201ENST00000269217 FAM114A1Q8IWE2 563 aa11.77□□□□□ -0.52
LAMA3-201ENST00000269217 ATP5J2-PTCD1G3V325 749 aa11.77□□□□□ -0.52
LAMA3-201ENST00000269217 CALML4Q96GE6 196 aa11.77□□□□□ -0.52
LAMA3-201ENST00000269217 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.52
LAMA3-201ENST00000269217 SNRKQ9NRH2 765 aa11.77□□□□□ -0.52
LAMA3-201ENST00000269217 EIF2AK4Q9P2K8 1649 aaKnown RBP11.77□□□□□ -0.52
LAMA3-201ENST00000269217 PTPRKQ15262 1439 aa11.77□□□□□ -0.52
LAMA3-201ENST00000269217 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 BICRAQ9NZM4 1560 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
LAMA3-201ENST00000269217 UQCRFS1P1P0C7P4 283 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
LAMA3-201ENST00000269217 HAND2P61296 217 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 ATP8B2P98198 1209 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 GIMAP6Q6P9H5 292 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 ALS2CR12Q96Q35 445 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.53
LAMA3-201ENST00000269217 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 RAPGEF6Q8TEU7 1601 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 ALDH1L1O75891 902 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 GPTP24298 496 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 BRF1Q92994 677 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 CUL5Q93034 780 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 UBA5Q9GZZ9 404 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
LAMA3-201ENST00000269217 CEP135Q66GS9 1140 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
LAMA3-201ENST00000269217 PDE4BQ07343 736 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 CCDC178Q5BJE1 867 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 PHF23Q9BUL5 403 aaPredicted RBP11.76□□□□□ -0.53
LAMA3-201ENST00000269217 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 ANKRD24Q8TF21 1146 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 DYDC1Q8WWB3 177 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 NAA15Q9BXJ9 866 aaKnown RBP11.76□□□□□ -0.53
LAMA3-201ENST00000269217 RBM8AQ9Y5S9 174 aaKnown RBP11.76□□□□□ -0.53
LAMA3-201ENST00000269217 LDHCP07864 332 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 CCDC144CPQ8IYA2 1237 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 NECAB1Q8N987 351 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 KCNG4Q8TDN1 519 aa11.76□□□□□ -0.53
LAMA3-201ENST00000269217 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 UBA7P41226 1012 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 SYKP43405 635 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 EHMT1Q9H9B1 1298 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 CALCOCO1Q9P1Z2 691 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 CNPY2Q9Y2B0 182 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 RBM25P49756 843 aaKnown RBP11.75□□□□□ -0.53
LAMA3-201ENST00000269217 FAM200AQ8TCP9 573 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 BMP15O95972 392 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 IFFO1Q0D2I5 559 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 USP48Q86UV5 1035 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 KRI1Q8N9T8 703 aaKnown RBP11.75□□□□□ -0.53
LAMA3-201ENST00000269217 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
LAMA3-201ENST00000269217 KAT14Q9H8E8 782 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 PIK3C2GO75747 1445 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
LAMA3-201ENST00000269217 INCENPQ9NQS7 918 aa11.75□□□□□ -0.53
LAMA3-201ENST00000269217 TSPY2A6NKD2 308 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 TRIM21P19474 475 aaKnown RBP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 CLCN1P35523 988 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 EXOC5O00471 708 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 F13A1P00488 732 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 ANXA1P04083 346 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 CCDC40Q4G0X9 1142 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 LRRC27Q9C0I9 530 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 PRDM10Q9NQV6 1147 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 RMND1Q9NWS8 449 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 POLR3GO15318 223 aaPredicted RBP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 BMS1Q14692 1282 aaKnown RBP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 EHBP1Q8NDI1 1231 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 RPGRQ92834 1020 aaKnown RBP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 PANK2Q9BZ23 570 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 KRT23Q9C075 422 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 BAG3O95817 575 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 XRCC6P12956 609 aaKnown RBP eCLIP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 MCMDC2Q4G0Z9 681 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
LAMA3-201ENST00000269217 SPTY2D1Q68D10 685 aaPredicted RBP11.74□□□□□ -0.53
LAMA3-201ENST00000269217 PPP4R3AQ6IN85 833 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms