RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 LARGE1O95461 756 aa14.98□□□□□ -0.01
BEST3-201ENST00000266661 PA2G4Q9UQ80 394 aaKnown RBP14.98□□□□□ -0.01
BEST3-201ENST00000266661 SYT1P21579 422 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 ST3GAL1Q11201 340 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
BEST3-201ENST00000266661 VPS53Q5VIR6 699 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 LARP1Q6PKG0 1096 aaKnown RBP14.97□□□□□ -0.01
BEST3-201ENST00000266661 ANKRD24Q8TF21 1146 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 RUFY2Q8WXA3 655 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 SUCLG2Q96I99 432 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 TSPY26PQ9H489 355 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 GDPD2Q9HCC8 539 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
BEST3-201ENST00000266661 HDAC5Q9UQL6 1122 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 MRC1P22897 1456 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 EP400Q96L91 3159 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 GRM8O00222 908 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 ADCK5Q3MIX3 580 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 C1orf141Q5JVX7 400 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 KIAA1211Q6ZU35 1233 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 EVI5LQ96CN4 794 aa14.97□□□□□ -0.01
BEST3-201ENST00000266661 QTRT2Q9H974 415 aaKnown RBP14.97□□□□□ -0.01
BEST3-201ENST00000266661 STX6O43752 255 aa14.96□□□□□ -0.01
BEST3-201ENST00000266661 MCM5P33992 734 aa14.96□□□□□ -0.01
BEST3-201ENST00000266661 TERF1P54274 439 aa14.96□□□□□ -0.01
BEST3-201ENST00000266661 EVA1CP58658 441 aa14.96□□□□□ -0.01
BEST3-201ENST00000266661 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
BEST3-201ENST00000266661 SYAP1Q96A49 352 aaPredicted RBP14.96□□□□□ -0.01
BEST3-201ENST00000266661 C9orf78Q9NZ63 289 aaPredicted RBP14.96□□□□□ -0.01
BEST3-201ENST00000266661 ZKSCAN5Q9Y2L8 839 aa14.96□□□□□ -0.01
BEST3-201ENST00000266661 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.96□□□□□ -0.01
BEST3-201ENST00000266661 TPM2P07951 284 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 CPA1P15085 419 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 MAP4K1Q92918 833 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 EAF2Q96CJ1 260 aaPredicted RBP14.95□□□□□ -0.02
BEST3-201ENST00000266661 DIAPH3Q9NSV4 1193 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 CCDC9Q9Y3X0 531 aaKnown RBP14.95□□□□□ -0.02
BEST3-201ENST00000266661 COL5A2P05997 1499 aaPredicted RBP14.95□□□□□ -0.02
BEST3-201ENST00000266661 F13A1P00488 732 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 IGKV5-2P06315 115 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 CASTP20810 708 aaKnown RBP14.95□□□□□ -0.02
BEST3-201ENST00000266661 MSNP26038 577 aaKnown RBP14.95□□□□□ -0.02
BEST3-201ENST00000266661 OS9Q13438 667 aaPredicted RBP14.95□□□□□ -0.02
BEST3-201ENST00000266661 ZSCAN31Q96LW9 406 aaPredicted RBP14.95□□□□□ -0.02
BEST3-201ENST00000266661 CNPY2Q9Y2B0 182 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 CCDC171Q6TFL3 1326 aa14.95□□□□□ -0.02
BEST3-201ENST00000266661 IFIT2P09913 472 aaKnown RBP14.94□□□□□ -0.02
BEST3-201ENST00000266661 LARP6Q9BRS8 491 aaKnown RBP14.94□□□□□ -0.02
BEST3-201ENST00000266661 BICC1Q9H694 974 aaKnown RBP14.94□□□□□ -0.02
BEST3-201ENST00000266661 MTMR6Q9Y217 621 aa14.94□□□□□ -0.02
BEST3-201ENST00000266661 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.94□□□□□ -0.02
BEST3-201ENST00000266661 UVSSAQ2YD98 709 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 PRPF40BQ6NWY9 871 aaKnown RBP14.93□□□□□ -0.02
BEST3-201ENST00000266661 LRP10Q7Z4F1 713 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 AACSQ86V21 672 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 GPATCH3Q96I76 525 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 SH2B1Q9NRF2 756 aaPredicted RBP14.93□□□□□ -0.02
BEST3-201ENST00000266661 PDRG1Q9NUG6 133 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 TCHHQ07283 1943 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 PHF14O94880 888 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 CSB-PGBD3P0DP91 1061 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 UBE2HP62256 183 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.93□□□□□ -0.02
BEST3-201ENST00000266661 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
BEST3-201ENST00000266661 ALDH8A1Q9H2A2 487 aaPredicted RBP14.93□□□□□ -0.02
BEST3-201ENST00000266661 CCDC39Q9UFE4 941 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 SMC3Q9UQE7 1217 aa14.93□□□□□ -0.02
BEST3-201ENST00000266661 KDM6AO15550 1401 aaPredicted RBP14.92□□□□□ -0.02
BEST3-201ENST00000266661 FOXD4L6Q3SYB3 417 aaPredicted RBP14.92□□□□□ -0.02
BEST3-201ENST00000266661 CCDC183Q5T5S1 534 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 ZNF772Q68DY9 489 aaPredicted RBP14.92□□□□□ -0.02
BEST3-201ENST00000266661 FOXD4L3Q6VB84 417 aaPredicted RBP14.92□□□□□ -0.02
BEST3-201ENST00000266661 RNF214Q8ND24 703 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 FUCA2Q9BTY2 467 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 RBM8AQ9Y5S9 174 aaKnown RBP14.92□□□□□ -0.02
BEST3-201ENST00000266661 ERBB3P21860 1342 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 MED23Q9ULK4 1368 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 GLI3P10071 1580 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 C5P01031 1676 aa14.92□□□□□ -0.02
BEST3-201ENST00000266661 HIP1O00291 1037 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 ABCC6O95255 1503 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 DDX58O95786 925 aaKnown RBP14.91□□□□□ -0.02
BEST3-201ENST00000266661 GJB2P29033 226 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 NMIQ13287 307 aaPredicted RBP14.91□□□□□ -0.02
BEST3-201ENST00000266661 COL9A3Q14050 684 aaPredicted RBP14.91□□□□□ -0.02
BEST3-201ENST00000266661 ME3Q16798 604 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 TOM1L2Q6ZVM7 507 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 FAM184AQ8NB25 1140 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 TLR7Q9NYK1 1049 aaKnown RBP14.91□□□□□ -0.02
BEST3-201ENST00000266661 CYP46A1Q9Y6A2 500 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 ZNF790Q6PG37 636 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 CCDC83Q8IWF9 413 aa14.91□□□□□ -0.02
BEST3-201ENST00000266661 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 ATRNO75882 1429 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 COL15A1P39059 1388 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 NEURL1BA8MQ27 555 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 SLC27A2O14975 620 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 LETM1O95202 739 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms