RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 MARCH10Q8NA82 808 aaPredicted RBP20.54■□□□□ 0.88
CHKA-201ENST00000265689 CCDC8Q9H0W5 538 aaPredicted RBP20.54■□□□□ 0.88
CHKA-201ENST00000265689 MCCP23508 829 aa20.53■□□□□ 0.88
CHKA-201ENST00000265689 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
CHKA-201ENST00000265689 TNS2Q63HR2 1409 aa20.53■□□□□ 0.88
CHKA-201ENST00000265689 AK9Q5TCS8 1911 aa20.53■□□□□ 0.88
CHKA-201ENST00000265689 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
CHKA-201ENST00000265689 TNPO1Q92973 898 aaKnown RBP20.53■□□□□ 0.88
CHKA-201ENST00000265689 GPATCH3Q96I76 525 aa20.53■□□□□ 0.88
CHKA-201ENST00000265689 RAB3GAP1Q15042 981 aa20.52■□□□□ 0.88
CHKA-201ENST00000265689 TLR7Q9NYK1 1049 aaKnown RBP20.52■□□□□ 0.88
CHKA-201ENST00000265689 SGSM2O43147 1006 aa20.52■□□□□ 0.87
CHKA-201ENST00000265689 KCNQ2O43526 872 aa20.52■□□□□ 0.87
CHKA-201ENST00000265689 NEK4P51957 841 aa20.52■□□□□ 0.87
CHKA-201ENST00000265689 CASP7P55210 303 aa20.52■□□□□ 0.87
CHKA-201ENST00000265689 RFX5P48382 616 aaPredicted RBP20.51■□□□□ 0.87
CHKA-201ENST00000265689 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
CHKA-201ENST00000265689 ATG3Q9NT62 314 aa20.51■□□□□ 0.87
CHKA-201ENST00000265689 RABL6Q3YEC7 729 aaPredicted RBP20.51■□□□□ 0.87
CHKA-201ENST00000265689 CWC27Q6UX04 472 aaKnown RBP20.51■□□□□ 0.87
CHKA-201ENST00000265689 IL27Q8NEV9 243 aa20.51■□□□□ 0.87
CHKA-201ENST00000265689 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
CHKA-201ENST00000265689 DOT1LQ8TEK3 1739 aa20.5■□□□□ 0.87
CHKA-201ENST00000265689 KCNQ4P56696 695 aa20.5■□□□□ 0.87
CHKA-201ENST00000265689 PTPN12Q05209 780 aaKnown RBP20.5■□□□□ 0.87
CHKA-201ENST00000265689 COPRSQ9NQ92 184 aa20.5■□□□□ 0.87
CHKA-201ENST00000265689 USP21Q9UK80 565 aa20.5■□□□□ 0.87
CHKA-201ENST00000265689 ANAPC15P60006 121 aa20.49■□□□□ 0.87
CHKA-201ENST00000265689 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
CHKA-201ENST00000265689 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
CHKA-201ENST00000265689 H7C1W4 665 aa20.48■□□□□ 0.87
CHKA-201ENST00000265689 COL15A1P39059 1388 aa20.48■□□□□ 0.87
CHKA-201ENST00000265689 LSG1Q9H089 658 aaKnown RBP20.48■□□□□ 0.87
CHKA-201ENST00000265689 CWC25Q9NXE8 425 aaPredicted RBP20.48■□□□□ 0.87
CHKA-201ENST00000265689 SSFA2P28290 1259 aa20.47■□□□□ 0.87
CHKA-201ENST00000265689 HSPA4P34932 840 aa20.47■□□□□ 0.87
CHKA-201ENST00000265689 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
CHKA-201ENST00000265689 ARXQ96QS3 562 aa20.47■□□□□ 0.87
CHKA-201ENST00000265689 DIAPH3Q9NSV4 1193 aa20.47■□□□□ 0.87
CHKA-201ENST00000265689 FOXO4P98177 505 aa20.47■□□□□ 0.87
CHKA-201ENST00000265689 NWD2Q9ULI1 1742 aa20.46■□□□□ 0.87
CHKA-201ENST00000265689 RAD50Q92878 1312 aa20.46■□□□□ 0.87
CHKA-201ENST00000265689 EPB41L2O43491 1005 aaKnown RBP20.46■□□□□ 0.87
CHKA-201ENST00000265689 ZGPATQ8N5A5 531 aaKnown RBP20.46■□□□□ 0.87
CHKA-201ENST00000265689 EVI5LQ96CN4 794 aa20.46■□□□□ 0.87
CHKA-201ENST00000265689 TFCP2Q12800 502 aa20.46■□□□□ 0.87
CHKA-201ENST00000265689 IL17RAQ96F46 866 aa20.46■□□□□ 0.87
CHKA-201ENST00000265689 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
CHKA-201ENST00000265689 BOLA2Q9H3K6 86 aa20.46■□□□□ 0.87
CHKA-201ENST00000265689 NUP188Q5SRE5 1749 aa20.45■□□□□ 0.86
CHKA-201ENST00000265689 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
CHKA-201ENST00000265689 KIAA1211Q6ZU35 1233 aa20.44■□□□□ 0.86
CHKA-201ENST00000265689 BCL9O00512 1426 aa20.44■□□□□ 0.86
CHKA-201ENST00000265689 TMX3Q96JJ7 454 aa20.44■□□□□ 0.86
CHKA-201ENST00000265689 DDX11L8A8MPP1 907 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 TRAK2O60296 914 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 NOL8Q76FK4 1167 aaKnown RBP20.43■□□□□ 0.86
CHKA-201ENST00000265689 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 GBP4Q96PP9 640 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.43■□□□□ 0.86
CHKA-201ENST00000265689 RTN4Q9NQC3 1192 aaKnown RBP20.43■□□□□ 0.86
CHKA-201ENST00000265689 AFF2P51816 1311 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 TNNI3KQ59H18 835 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 SMIM5Q71RC9 77 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 RUFY2Q8WXA3 655 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 FPGT-TNNI3KV9GXZ4 949 aa20.43■□□□□ 0.86
CHKA-201ENST00000265689 FNBP4Q8N3X1 1017 aaPredicted RBP20.42■□□□□ 0.86
CHKA-201ENST00000265689 DBNLQ9UJU6 430 aaKnown RBP20.42■□□□□ 0.86
CHKA-201ENST00000265689 SNX14Q9Y5W7 946 aa20.42■□□□□ 0.86
CHKA-201ENST00000265689 PTH1RQ03431 593 aa20.42■□□□□ 0.86
CHKA-201ENST00000265689 PKP1Q13835 747 aa20.42■□□□□ 0.86
CHKA-201ENST00000265689 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
CHKA-201ENST00000265689 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
CHKA-201ENST00000265689 CWC22Q9HCG8 908 aaKnown RBP20.41■□□□□ 0.86
CHKA-201ENST00000265689 MCM2P49736 904 aa20.41■□□□□ 0.86
CHKA-201ENST00000265689 FAM227BQ96M60 508 aa20.41■□□□□ 0.86
CHKA-201ENST00000265689 TEX13AQ9BXU3 409 aaPredicted RBP20.41■□□□□ 0.86
CHKA-201ENST00000265689 GZF1Q9H116 711 aaPredicted RBP20.41■□□□□ 0.86
CHKA-201ENST00000265689 TJP1Q07157 1748 aa20.4■□□□□ 0.86
CHKA-201ENST00000265689 VPS72Q15906 364 aa20.4■□□□□ 0.86
CHKA-201ENST00000265689 THRAP3Q9Y2W1 955 aaKnown RBP20.4■□□□□ 0.86
CHKA-201ENST00000265689 NMIQ13287 307 aaPredicted RBP20.4■□□□□ 0.86
CHKA-201ENST00000265689 TCIRG1Q13488 830 aa20.4■□□□□ 0.86
CHKA-201ENST00000265689 EDC3Q96F86 508 aaKnown RBP20.4■□□□□ 0.86
CHKA-201ENST00000265689 ISCA1Q9BUE6 129 aa20.4■□□□□ 0.86
CHKA-201ENST00000265689 STARD3NLO95772 234 aa20.39■□□□□ 0.85
CHKA-201ENST00000265689 NUCB2P80303 420 aa20.38■□□□□ 0.85
CHKA-201ENST00000265689 BARGINQ6ZT62 677 aa20.38■□□□□ 0.85
CHKA-201ENST00000265689 DBNDD2Q9BQY9 259 aa20.38■□□□□ 0.85
CHKA-201ENST00000265689 FSD1Q9BTV5 496 aa20.38■□□□□ 0.85
CHKA-201ENST00000265689 SPATA31A6Q5VVP1 1343 aa20.38■□□□□ 0.85
CHKA-201ENST00000265689 CYP2E1P05181 493 aaPredicted RBP20.38■□□□□ 0.85
CHKA-201ENST00000265689 ATG9AQ7Z3C6 839 aa20.38■□□□□ 0.85
CHKA-201ENST00000265689 ATP5JP18859 108 aa20.37■□□□□ 0.85
CHKA-201ENST00000265689 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
CHKA-201ENST00000265689 ZNF594Q96JF6 807 aaPredicted RBP20.37■□□□□ 0.85
CHKA-201ENST00000265689 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
CHKA-201ENST00000265689 NDUFB9Q9Y6M9 179 aa20.37■□□□□ 0.85
CHKA-201ENST00000265689 HIP1O00291 1037 aa20.36■□□□□ 0.85
CHKA-201ENST00000265689 CUL4AQ13619 759 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms