RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TECPR2O15040 1411 aa14.74□□□□□ -0.05
CHMP3-201ENST00000263856 PPP4R3BQ5MIZ7 849 aa14.74□□□□□ -0.05
CHMP3-201ENST00000263856 ZNF592Q92610 1267 aa14.74□□□□□ -0.05
CHMP3-201ENST00000263856 VPS53Q5VIR6 699 aa14.74□□□□□ -0.05
CHMP3-201ENST00000263856 TMEM87AQ8NBN3 555 aa14.74□□□□□ -0.05
CHMP3-201ENST00000263856 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
CHMP3-201ENST00000263856 PTPRUQ92729 1446 aa14.74□□□□□ -0.05
CHMP3-201ENST00000263856 A0A0D9SFI3 127 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 GOLGA6L6A8MZA4 724 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 ST3GAL1Q11201 340 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 LRMPQ12912 555 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 ANO6Q4KMQ2 910 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 HMGN5P82970 282 aaKnown RBP14.73□□□□□ -0.05
CHMP3-201ENST00000263856 C1orf141Q5JVX7 400 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 LARP1Q6PKG0 1096 aaKnown RBP14.73□□□□□ -0.05
CHMP3-201ENST00000263856 KCNF1Q9H3M0 494 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 TYRO3Q06418 890 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 CCDC186Q7Z3E2 898 aa14.73□□□□□ -0.05
CHMP3-201ENST00000263856 ZSCAN31Q96LW9 406 aaPredicted RBP14.73□□□□□ -0.05
CHMP3-201ENST00000263856 DNAJC2Q99543 621 aaKnown RBP14.73□□□□□ -0.05
CHMP3-201ENST00000263856 SH2B1Q9NRF2 756 aaPredicted RBP14.73□□□□□ -0.05
CHMP3-201ENST00000263856 RGPD8O14715 1765 aaPredicted RBP14.73□□□□□ -0.05
CHMP3-201ENST00000263856 CHGBP05060 677 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 KCNA6P17658 529 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 MTERF4Q7Z6M4 381 aaKnown RBP14.72□□□□□ -0.05
CHMP3-201ENST00000263856 EAF2Q96CJ1 260 aaPredicted RBP14.72□□□□□ -0.05
CHMP3-201ENST00000263856 EVI5LQ96CN4 794 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 BICC1Q9H694 974 aaKnown RBP14.72□□□□□ -0.05
CHMP3-201ENST00000263856 NRBP1Q9UHY1 535 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 XRN1Q8IZH2 1706 aaKnown RBP14.72□□□□□ -0.05
CHMP3-201ENST00000263856 TTC41PQ6P2S7 1318 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 FAM208AQ9UK61 1670 aaKnown RBP14.72□□□□□ -0.05
CHMP3-201ENST00000263856 H3BQV1 296 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 RIOK3O14730 519 aaKnown RBP14.72□□□□□ -0.05
CHMP3-201ENST00000263856 IFFO2Q5TF58 517 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 SUCLG2Q96I99 432 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 BCL2L12Q9HB09 334 aa14.72□□□□□ -0.05
CHMP3-201ENST00000263856 A0A087WWV3 80 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 SLC27A2O14975 620 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 JAK2O60674 1132 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 IGSF3O75054 1194 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 RIC3Q7Z5B4 369 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 ZNF710Q8N1W2 664 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 PRIMPOLQ96LW4 560 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 RGPD1P0DJD0 1748 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 DNAJC25Q9H1X3 360 aa14.71□□□□□ -0.05
CHMP3-201ENST00000263856 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
CHMP3-201ENST00000263856 FMN2Q9NZ56 1722 aa14.71□□□□□ -0.06
CHMP3-201ENST00000263856 PSME1Q06323 249 aa14.71□□□□□ -0.06
CHMP3-201ENST00000263856 CCDC129Q6ZRS4 1044 aa14.71□□□□□ -0.06
CHMP3-201ENST00000263856 ADCY9O60503 1353 aa14.7□□□□□ -0.06
CHMP3-201ENST00000263856 SLC39A6Q13433 755 aa14.7□□□□□ -0.06
CHMP3-201ENST00000263856 ZNF589Q86UQ0 364 aaPredicted RBP14.7□□□□□ -0.06
CHMP3-201ENST00000263856 ESCO1Q5FWF5 840 aa14.7□□□□□ -0.06
CHMP3-201ENST00000263856 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
CHMP3-201ENST00000263856 FAM200AQ8TCP9 573 aa14.7□□□□□ -0.06
CHMP3-201ENST00000263856 CCDC94Q9BW85 323 aaPredicted RBP14.7□□□□□ -0.06
CHMP3-201ENST00000263856 PSMA5P28066 241 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 NECTIN1Q15223 517 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 FUCA2Q9BTY2 467 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 SASH1O94885 1247 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 MRVI1Q9Y6F6 885 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 ERC1Q8IUD2 1116 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 PDCL2Q8N4E4 241 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 KIAA1524Q8TCG1 905 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 CBX8Q9HC52 389 aa14.69□□□□□ -0.06
CHMP3-201ENST00000263856 TUBGCP6Q96RT7 1819 aa14.68□□□□□ -0.06
CHMP3-201ENST00000263856 NR1I2O75469 434 aa14.68□□□□□ -0.06
CHMP3-201ENST00000263856 GUCY1B3Q02153 619 aa14.68□□□□□ -0.06
CHMP3-201ENST00000263856 GRM8O00222 908 aa14.68□□□□□ -0.06
CHMP3-201ENST00000263856 ERCC4Q92889 916 aaPredicted RBP14.68□□□□□ -0.06
CHMP3-201ENST00000263856 SEC62Q99442 399 aaKnown RBP14.68□□□□□ -0.06
CHMP3-201ENST00000263856 U2AF2P26368 475 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHMP3-201ENST00000263856 PDCP20941 246 aa14.67□□□□□ -0.06
CHMP3-201ENST00000263856 PLEKHO1Q53GL0 409 aaPredicted RBP14.67□□□□□ -0.06
CHMP3-201ENST00000263856 KSR2Q6VAB6 950 aa14.67□□□□□ -0.06
CHMP3-201ENST00000263856 ZNF165P49910 485 aa14.67□□□□□ -0.06
CHMP3-201ENST00000263856 BRF1Q92994 677 aa14.67□□□□□ -0.06
CHMP3-201ENST00000263856 FTOQ9C0B1 505 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHMP3-201ENST00000263856 PHF8Q9UPP1 1060 aa14.67□□□□□ -0.06
CHMP3-201ENST00000263856 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 AGLP35573 1532 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 EPB41L2O43491 1005 aaKnown RBP14.66□□□□□ -0.06
CHMP3-201ENST00000263856 ATP2B3Q16720 1220 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 MYD88Q99836 296 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 DIP2BQ9P265 1576 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 GOLGA6L19H0YKK7 550 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 TPD52L1Q16890 204 aaPredicted RBP14.66□□□□□ -0.06
CHMP3-201ENST00000263856 SLFNL1Q499Z3 407 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 DDX46Q7L014 1031 aaKnown RBP14.66□□□□□ -0.06
CHMP3-201ENST00000263856 MAP4K1Q92918 833 aa14.66□□□□□ -0.06
CHMP3-201ENST00000263856 RPS6KB1P23443 525 aa14.65□□□□□ -0.06
CHMP3-201ENST00000263856 CCT2P78371 535 aaKnown RBP14.65□□□□□ -0.06
CHMP3-201ENST00000263856 LEO1Q8WVC0 666 aaPredicted RBP14.65□□□□□ -0.06
CHMP3-201ENST00000263856 CLIP2Q9UDT6 1046 aa14.65□□□□□ -0.06
CHMP3-201ENST00000263856 NAA30Q147X3 362 aaPredicted RBP14.65□□□□□ -0.06
CHMP3-201ENST00000263856 FILIP1Q7Z7B0 1213 aa14.65□□□□□ -0.06
CHMP3-201ENST00000263856 NALCNQ8IZF0 1738 aa14.65□□□□□ -0.06
CHMP3-201ENST00000263856 DDX58O95786 925 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms