RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 CYP46A1Q9Y6A2 500 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 MCM5P33992 734 aa19.77■□□□□ 0.76
ZNF541-201ENST00000263351 MYL6BP14649 208 aa19.77■□□□□ 0.75
ZNF541-201ENST00000263351 EPHA10Q5JZY3 1008 aa19.77■□□□□ 0.75
ZNF541-201ENST00000263351 PIBF1Q8WXW3 757 aa19.77■□□□□ 0.75
ZNF541-201ENST00000263351 LRRC2Q9BYS8 371 aa19.77■□□□□ 0.75
ZNF541-201ENST00000263351 CACNA1FO60840 1977 aa19.76■□□□□ 0.75
ZNF541-201ENST00000263351 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
ZNF541-201ENST00000263351 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
ZNF541-201ENST00000263351 JAK2O60674 1132 aa19.76■□□□□ 0.75
ZNF541-201ENST00000263351 TBX22Q9Y458 520 aa19.76■□□□□ 0.75
ZNF541-201ENST00000263351 SLC27A2O14975 620 aa19.75■□□□□ 0.75
ZNF541-201ENST00000263351 TERF1P54274 439 aa19.75■□□□□ 0.75
ZNF541-201ENST00000263351 LARP1Q6PKG0 1096 aaKnown RBP19.75■□□□□ 0.75
ZNF541-201ENST00000263351 SEC62Q99442 399 aaKnown RBP19.75■□□□□ 0.75
ZNF541-201ENST00000263351 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
ZNF541-201ENST00000263351 IP6K1Q92551 441 aa19.75■□□□□ 0.75
ZNF541-201ENST00000263351 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
ZNF541-201ENST00000263351 ESCO1Q5FWF5 840 aa19.74■□□□□ 0.75
ZNF541-201ENST00000263351 NRBP1Q9UHY1 535 aa19.74■□□□□ 0.75
ZNF541-201ENST00000263351 PHF8Q9UPP1 1060 aa19.74■□□□□ 0.75
ZNF541-201ENST00000263351 LTN1O94822 1766 aa19.74■□□□□ 0.75
ZNF541-201ENST00000263351 LRMPQ12912 555 aa19.74■□□□□ 0.75
ZNF541-201ENST00000263351 FSD1Q9BTV5 496 aa19.74■□□□□ 0.75
ZNF541-201ENST00000263351 N4BP2Q86UW6 1770 aaPredicted RBP19.74■□□□□ 0.75
ZNF541-201ENST00000263351 DYNC1I1O14576 645 aa19.73■□□□□ 0.75
ZNF541-201ENST00000263351 CEBPZQ03701 1054 aaKnown RBP19.73■□□□□ 0.75
ZNF541-201ENST00000263351 TTC41PQ6P2S7 1318 aa19.73■□□□□ 0.75
ZNF541-201ENST00000263351 PTGS1P23219 599 aa19.73■□□□□ 0.75
ZNF541-201ENST00000263351 DBF4Q9UBU7 674 aaPredicted RBP19.73■□□□□ 0.75
ZNF541-201ENST00000263351 AXIN2Q9Y2T1 843 aa19.73■□□□□ 0.75
ZNF541-201ENST00000263351 COL15A1P39059 1388 aa19.72■□□□□ 0.75
ZNF541-201ENST00000263351 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
ZNF541-201ENST00000263351 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
ZNF541-201ENST00000263351 FTOQ9C0B1 505 aaKnown RBP eCLIP19.72■□□□□ 0.75
ZNF541-201ENST00000263351 DACT1Q9NYF0 836 aa19.72■□□□□ 0.75
ZNF541-201ENST00000263351 IGKV5-2P06315 115 aa19.72■□□□□ 0.75
ZNF541-201ENST00000263351 FAM184AQ8NB25 1140 aa19.72■□□□□ 0.75
ZNF541-201ENST00000263351 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
ZNF541-201ENST00000263351 A0A0G2JLW4 131 aa19.71■□□□□ 0.75
ZNF541-201ENST00000263351 KSR2Q6VAB6 950 aa19.71■□□□□ 0.75
ZNF541-201ENST00000263351 MYRIPQ8NFW9 859 aa19.71■□□□□ 0.75
ZNF541-201ENST00000263351 MAP4K1Q92918 833 aa19.71■□□□□ 0.75
ZNF541-201ENST00000263351 MRVI1Q9Y6F6 885 aa19.71■□□□□ 0.75
ZNF541-201ENST00000263351 UVSSAQ2YD98 709 aa19.7■□□□□ 0.74
ZNF541-201ENST00000263351 RUFY2Q8WXA3 655 aa19.7■□□□□ 0.74
ZNF541-201ENST00000263351 EVI5LQ96CN4 794 aa19.7■□□□□ 0.74
ZNF541-201ENST00000263351 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
ZNF541-201ENST00000263351 GRM8O00222 908 aa19.7■□□□□ 0.74
ZNF541-201ENST00000263351 ZKSCAN1P17029 563 aaPredicted RBP19.7■□□□□ 0.74
ZNF541-201ENST00000263351 PSME1Q06323 249 aa19.7■□□□□ 0.74
ZNF541-201ENST00000263351 CRYBG1Q9Y4K1 1723 aa19.7■□□□□ 0.74
ZNF541-201ENST00000263351 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
ZNF541-201ENST00000263351 NPHP4O75161 1426 aaPredicted RBP19.69■□□□□ 0.74
ZNF541-201ENST00000263351 MTX1Q13505 466 aa19.69■□□□□ 0.74
ZNF541-201ENST00000263351 HSP90AB4PQ58FF6 505 aa19.69■□□□□ 0.74
ZNF541-201ENST00000263351 ERCC4Q92889 916 aaPredicted RBP19.69■□□□□ 0.74
ZNF541-201ENST00000263351 NR1I2O75469 434 aa19.68■□□□□ 0.74
ZNF541-201ENST00000263351 G3BP1Q13283 466 aaKnown RBP eCLIP19.68■□□□□ 0.74
ZNF541-201ENST00000263351 ANO6Q4KMQ2 910 aa19.68■□□□□ 0.74
ZNF541-201ENST00000263351 AKAP4Q5JQC9 854 aa19.68■□□□□ 0.74
ZNF541-201ENST00000263351 TYRO3Q06418 890 aa19.68■□□□□ 0.74
ZNF541-201ENST00000263351 PDIA6Q15084 440 aa19.68■□□□□ 0.74
ZNF541-201ENST00000263351 BABAM1Q9NWV8 329 aa19.68■□□□□ 0.74
ZNF541-201ENST00000263351 BLOC1S2Q6QNY1 142 aa19.67■□□□□ 0.74
ZNF541-201ENST00000263351 KIAA1524Q8TCG1 905 aa19.67■□□□□ 0.74
ZNF541-201ENST00000263351 FBXW7Q969H0 707 aa19.67■□□□□ 0.74
ZNF541-201ENST00000263351 PGBD1Q96JS3 809 aa19.67■□□□□ 0.74
ZNF541-201ENST00000263351 KDM3BQ7LBC6 1761 aa19.67■□□□□ 0.74
ZNF541-201ENST00000263351 C1orf141Q5JVX7 400 aa19.67■□□□□ 0.74
ZNF541-201ENST00000263351 DNAJC2Q99543 621 aaKnown RBP19.67■□□□□ 0.74
ZNF541-201ENST00000263351 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
ZNF541-201ENST00000263351 KCNB2Q92953 911 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 NUP62CLQ9H1M0 184 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 USP16Q9Y5T5 823 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
ZNF541-201ENST00000263351 EPB41L2O43491 1005 aaKnown RBP19.66■□□□□ 0.74
ZNF541-201ENST00000263351 CBX1P83916 185 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 NAA30Q147X3 362 aaPredicted RBP19.66■□□□□ 0.74
ZNF541-201ENST00000263351 RIC3Q7Z5B4 369 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 MYD88Q99836 296 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 BCL2L12Q9HB09 334 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 CBX8Q9HC52 389 aa19.66■□□□□ 0.74
ZNF541-201ENST00000263351 SH2B1Q9NRF2 756 aaPredicted RBP19.66■□□□□ 0.74
ZNF541-201ENST00000263351 ATP5J2-PTCD1G3V325 749 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 RIOK3O14730 519 aaKnown RBP19.65■□□□□ 0.74
ZNF541-201ENST00000263351 PTCD1O75127 700 aaKnown RBP19.65■□□□□ 0.74
ZNF541-201ENST00000263351 KRT85P78386 507 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 GPATCH3Q96I76 525 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 DNAJC25Q9H1X3 360 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 SPDYE4A6NLX3 237 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 CCDC192P0DO97 292 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 RPS6KB1P23443 525 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 ARID5BQ14865 1188 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 ATP2B3Q16720 1220 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 CCDC186Q7Z3E2 898 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 ANKRD24Q8TF21 1146 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 SPATA32Q96LK8 384 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 TM6SF1Q9BZW5 370 aa19.65■□□□□ 0.74
ZNF541-201ENST00000263351 DBNLQ9UJU6 430 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms