RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 LDHCP07864 332 aa25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 CFAP100Q494V2 611 aa25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 CATIPQ7Z7H3 387 aa25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 TANGO6Q9C0B7 1094 aa25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 IARSP41252 1262 aaKnown RBP25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 CRACR2BQ8N4Y2 399 aaPredicted RBP25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 RBM8AQ9Y5S9 174 aaKnown RBP25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 TFIP11Q9UBB9 837 aaKnown RBP25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 ORC3Q9UBD5 711 aaPredicted RBP25.47■■□□□ 1.67
RAB11FIP3-201ENST00000262305 TMEM67Q5HYA8 995 aa25.46■■□□□ 1.67
RAB11FIP3-201ENST00000262305 TRIM35Q9UPQ4 493 aa25.46■■□□□ 1.67
RAB11FIP3-201ENST00000262305 VSIG10Q8N0Z9 540 aa25.46■■□□□ 1.67
RAB11FIP3-201ENST00000262305 PA2G4Q9UQ80 394 aaKnown RBP25.46■■□□□ 1.67
RAB11FIP3-201ENST00000262305 KLHL40Q2TBA0 621 aa25.46■■□□□ 1.67
RAB11FIP3-201ENST00000262305 DEF6Q9H4E7 631 aa25.46■■□□□ 1.67
RAB11FIP3-201ENST00000262305 ZMYM4Q5VZL5 1548 aa25.46■■□□□ 1.67
RAB11FIP3-201ENST00000262305 MPHOSPH10O00566 681 aaKnown RBP25.45■■□□□ 1.67
RAB11FIP3-201ENST00000262305 CWF19L2Q2TBE0 894 aaKnown RBP25.45■■□□□ 1.67
RAB11FIP3-201ENST00000262305 PLEKHM2Q8IWE5 1019 aa25.45■■□□□ 1.66
RAB11FIP3-201ENST00000262305 PRM3Q9NNZ6 103 aa25.45■■□□□ 1.66
RAB11FIP3-201ENST00000262305 SPATA31E1Q6ZUB1 1445 aa25.45■■□□□ 1.66
RAB11FIP3-201ENST00000262305 SYCP1Q15431 976 aa25.45■■□□□ 1.66
RAB11FIP3-201ENST00000262305 BRF1Q92994 677 aa25.45■■□□□ 1.66
RAB11FIP3-201ENST00000262305 DDX21Q9NR30 783 aaKnown RBP eCLIP25.45■■□□□ 1.66
RAB11FIP3-201ENST00000262305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.45■■□□□ 1.667e-7■■■■■ 45.3
RAB11FIP3-201ENST00000262305 ZNF76P36508 570 aa25.44■■□□□ 1.66
RAB11FIP3-201ENST00000262305 ZFYVE27Q5T4F4 411 aa25.44■■□□□ 1.66
RAB11FIP3-201ENST00000262305 MCM5P33992 734 aa25.44■■□□□ 1.66
RAB11FIP3-201ENST00000262305 MFSD6Q6ZSS7 791 aa25.44■■□□□ 1.66
RAB11FIP3-201ENST00000262305 CHL1O00533 1208 aa25.44■■□□□ 1.66
RAB11FIP3-201ENST00000262305 TXLNBQ8N3L3 684 aa25.44■■□□□ 1.66
RAB11FIP3-201ENST00000262305 MCMDC2Q4G0Z9 681 aa25.44■■□□□ 1.66
RAB11FIP3-201ENST00000262305 ADGBQ8N7X0 1667 aa25.43■■□□□ 1.66
RAB11FIP3-201ENST00000262305 FSIP1Q8NA03 581 aa25.43■■□□□ 1.66
RAB11FIP3-201ENST00000262305 SMARCC1Q92922 1105 aaPredicted RBP25.43■■□□□ 1.66
RAB11FIP3-201ENST00000262305 C6orf229H3BNL8 230 aa25.43■■□□□ 1.66
RAB11FIP3-201ENST00000262305 UBE2HP62256 183 aa25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 MICU3Q86XE3 530 aa25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 SBNO2Q9Y2G9 1366 aa25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 HOXB7P09629 217 aa25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 TMEM132AQ24JP5 1023 aa25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 SPTY2D1Q68D10 685 aaPredicted RBP25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 DDB1Q16531 1140 aa25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 CKAP2LQ8IYA6 745 aa25.42■■□□□ 1.66
RAB11FIP3-201ENST00000262305 BAG3O95817 575 aa25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 METAP2P50579 478 aaKnown RBP eCLIP25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 NBPF5PQ86XG9 351 aaPredicted RBP25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 ZSCAN16Q9H4T2 348 aaPredicted RBP25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 ZSCAN22P10073 491 aaPredicted RBP25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 ATP6V1AP38606 617 aa25.41■■□□□ 1.66
RAB11FIP3-201ENST00000262305 PLEKHG3A1L390 1219 aa25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 ABCA8O94911 1581 aa25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 BLMP54132 1417 aaPredicted RBP25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 SFPQP23246 707 aaKnown RBP eCLIP25.4■■□□□ 1.666e-6■□□□□ 8.7
RAB11FIP3-201ENST00000262305 RFC4P35249 363 aa25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 G2E3Q7L622 706 aa25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 CCDC194A0A1B0GVG4 234 aa25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 PDE4BQ07343 736 aa25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 NLRP5P59047 1200 aa25.4■■□□□ 1.66
RAB11FIP3-201ENST00000262305 TOM1O60784 492 aa25.39■■□□□ 1.66
RAB11FIP3-201ENST00000262305 ANKRD18AQ8IVF6 992 aa25.39■■□□□ 1.66
RAB11FIP3-201ENST00000262305 SIRT1Q96EB6 747 aa25.39■■□□□ 1.66
RAB11FIP3-201ENST00000262305 TMEM2Q9UHN6 1383 aa25.39■■□□□ 1.66
RAB11FIP3-201ENST00000262305 KIF5BP33176 963 aa25.39■■□□□ 1.65
RAB11FIP3-201ENST00000262305 NOM1Q5C9Z4 860 aaKnown RBP25.39■■□□□ 1.65
RAB11FIP3-201ENST00000262305 FAM177A1Q8N128 213 aaPredicted RBP25.39■■□□□ 1.65
RAB11FIP3-201ENST00000262305 NECAB1Q8N987 351 aa25.39■■□□□ 1.65
RAB11FIP3-201ENST00000262305 MYO6Q9UM54 1294 aa25.39■■□□□ 1.65
RAB11FIP3-201ENST00000262305 EIF5P55010 431 aaKnown RBP25.38■■□□□ 1.65
RAB11FIP3-201ENST00000262305 CNNM3Q8NE01 707 aa25.38■■□□□ 1.65
RAB11FIP3-201ENST00000262305 HSPA2P54652 639 aa25.38■■□□□ 1.65
RAB11FIP3-201ENST00000262305 KLF18A0A0U1RQI7 1052 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 TCEANC2Q96MN5 208 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 TSPY2A6NKD2 308 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 NMIQ13287 307 aaPredicted RBP25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 RAB34Q9BZG1 259 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 PCDH11XQ9BZA7 1347 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 PCDH11YQ9BZA8 1340 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 ACSBG1Q96GR2 724 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 USP25Q9UHP3 1055 aa25.37■■□□□ 1.65
RAB11FIP3-201ENST00000262305 PAG1Q9NWQ8 432 aa25.36■■□□□ 1.65
RAB11FIP3-201ENST00000262305 EPB41L2O43491 1005 aaKnown RBP25.36■■□□□ 1.65
RAB11FIP3-201ENST00000262305 RNF123Q5XPI4 1314 aa25.36■■□□□ 1.65
RAB11FIP3-201ENST00000262305 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 CRNKL1Q9BZJ0 848 aaKnown RBP25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 SETQ01105 290 aaPredicted RBP25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 CCDC96Q2M329 555 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 KLHL10Q6JEL2 608 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 DZIP3Q86Y13 1208 aaKnown RBP25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 CCDC144CPQ8IYA2 1237 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 NLRP3Q96P20 1036 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 ZNF790Q6PG37 636 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 NIP7Q9Y221 180 aaKnown RBP eCLIP25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 CHMLP26374 656 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 KRT23Q9C075 422 aa25.35■■□□□ 1.65
RAB11FIP3-201ENST00000262305 PDCL3Q9H2J4 239 aa25.34■■□□□ 1.65
RAB11FIP3-201ENST00000262305 SLC9C2Q5TAH2 1124 aa25.34■■□□□ 1.65
RAB11FIP3-201ENST00000262305 SETDB2Q96T68 719 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms