RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 SLC26A6Q9BXS9 759 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
PHF3-201ENST00000262043 TSPY2A6NKD2 308 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 TCP11L1Q9NUJ3 509 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 KIF5BP33176 963 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 EHMT1Q9H9B1 1298 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 IARSP41252 1262 aaKnown RBP11.81□□□□□ -0.52
PHF3-201ENST00000262043 UBE2HP62256 183 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 IDI1Q13907 227 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 CCDC97Q96F63 343 aaPredicted RBP11.81□□□□□ -0.52
PHF3-201ENST00000262043 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 POLR3GO15318 223 aaPredicted RBP11.81□□□□□ -0.52
PHF3-201ENST00000262043 PDE4BQ07343 736 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 TTLL12Q14166 644 aaPredicted RBP11.81□□□□□ -0.52
PHF3-201ENST00000262043 KRT28Q7Z3Y7 464 aa11.81□□□□□ -0.52
PHF3-201ENST00000262043 USP8P40818 1118 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 PAFAH1B1P43034 410 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 EXOC5O00471 708 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 AMPD3Q01432 767 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 FBLN1P23142 703 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
PHF3-201ENST00000262043 CDC5LQ99459 802 aaKnown RBP11.8□□□□□ -0.52
PHF3-201ENST00000262043 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
PHF3-201ENST00000262043 GSDMDP57764 484 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 NCOA7Q8NI08 942 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
PHF3-201ENST00000262043 CGNQ9P2M7 1197 aaKnown RBP11.8□□□□□ -0.52
PHF3-201ENST00000262043 INCENPQ9NQS7 918 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 RALGAPBQ86X10 1494 aa11.8□□□□□ -0.52
PHF3-201ENST00000262043 CCDC12Q8WUD4 166 aaPredicted RBP11.8□□□□□ -0.52
PHF3-201ENST00000262043 NUCB1Q02818 461 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 TCERG1LQ5VWI1 586 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 SYCP3Q8IZU3 236 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 HMG20BQ9P0W2 317 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 BAG3O95817 575 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 CHPF2Q9P2E5 772 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
PHF3-201ENST00000262043 SAMM50Q9Y512 469 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 PKNOX2Q96KN3 472 aa11.79□□□□□ -0.52
PHF3-201ENST00000262043 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
PHF3-201ENST00000262043 NOP2P46087 812 aaKnown RBP11.78□□□□□ -0.52
PHF3-201ENST00000262043 CEBPAP49715 358 aaPredicted RBP11.78□□□□□ -0.52
PHF3-201ENST00000262043 TBC1D32Q96NH3 1257 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 ALS2CR12Q96Q35 445 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 TMCO5BA8MYB1 307 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 CTNNA2P26232 953 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 PRPF4BQ13523 1007 aaKnown RBP11.78□□□□□ -0.52
PHF3-201ENST00000262043 HLTFQ14527 1009 aaKnown RBP eCLIP11.78□□□□□ -0.521e-7■■□□□ 11.8
PHF3-201ENST00000262043 GCOM1H8Y6P7 765 aaPredicted RBP11.78□□□□□ -0.52
PHF3-201ENST00000262043 ANXA1P04083 346 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 MYZAPP0CAP1 466 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 MCM5P33992 734 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 SNW1Q13573 536 aaKnown RBP11.78□□□□□ -0.52
PHF3-201ENST00000262043 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 NGLY1Q96IV0 654 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 KDM5BQ9UGL1 1544 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 ACEP12821 1306 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 FEZ1Q99689 392 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 KIF20AO95235 890 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 ZNF165P49910 485 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 MAPK8IP2Q13387 824 aaPredicted RBP11.78□□□□□ -0.52
PHF3-201ENST00000262043 KANK3Q6NY19 840 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 GIMAP6Q6P9H5 292 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 DHX29Q7Z478 1369 aaKnown RBP11.78□□□□□ -0.52
PHF3-201ENST00000262043 CETN1Q12798 172 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 NECAB1Q8N987 351 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 FERMT2Q96AC1 680 aa11.78□□□□□ -0.52
PHF3-201ENST00000262043 CFAP43Q8NDM7 1665 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 NEMFO60524 1076 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 SDSP20132 328 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 UBA7P41226 1012 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 IDEP14735 1019 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 UBE4AQ14139 1066 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 FAM114A1Q8IWE2 563 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 MMRN2Q9H8L6 949 aa11.77□□□□□ -0.52
PHF3-201ENST00000262043 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
PHF3-201ENST00000262043 JADE2Q9NQC1 790 aa11.77□□□□□ -0.53
PHF3-201ENST00000262043 HOOK3Q86VS8 718 aa11.77□□□□□ -0.53
PHF3-201ENST00000262043 LRRC2Q9BYS8 371 aa11.77□□□□□ -0.53
PHF3-201ENST00000262043 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.53
PHF3-201ENST00000262043 SNRPA1P09661 255 aaKnown RBP11.77□□□□□ -0.53
PHF3-201ENST00000262043 IFIT1BQ5T764 474 aaKnown RBP11.77□□□□□ -0.53
PHF3-201ENST00000262043 TEX13AQ9BXU3 409 aaPredicted RBP11.77□□□□□ -0.53
PHF3-201ENST00000262043 RFC4P35249 363 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 TAOK3Q9H2K8 898 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 EXOC1Q9NV70 894 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 DUOX2Q9NRD8 1548 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 SPECC1Q5M775 1068 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 CEP135Q66GS9 1140 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 SYKP43405 635 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 CTR9Q6PD62 1173 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 NAA15Q9BXJ9 866 aaKnown RBP11.76□□□□□ -0.53
PHF3-201ENST00000262043 WTAPQ15007 396 aa11.76□□□□□ -0.53
PHF3-201ENST00000262043 CCDC102BQ68D86 513 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms