RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 STAMBPO95630 424 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 SDSP20132 328 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 SYKP43405 635 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 HS1BP3Q53T59 392 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 TCP11L1Q9NUJ3 509 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 TSHZ3Q63HK5 1081 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 CALML4Q96GE6 196 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 ZFP91Q96JP5 570 aaPredicted RBP17.12■□□□□ 0.33
C12orf49-201ENST00000261318 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
C12orf49-201ENST00000261318 ABCC5O15440 1437 aa17.12■□□□□ 0.33
C12orf49-201ENST00000261318 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.33
C12orf49-201ENST00000261318 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
C12orf49-201ENST00000261318 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
C12orf49-201ENST00000261318 LIG1P18858 919 aa17.12■□□□□ 0.33
C12orf49-201ENST00000261318 NOP2P46087 812 aaKnown RBP17.12■□□□□ 0.33
C12orf49-201ENST00000261318 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
C12orf49-201ENST00000261318 SLC5A1P13866 664 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 CTAGE1Q96RT6 745 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
C12orf49-201ENST00000261318 NESP48681 1621 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 MACROD2A1Z1Q3 448 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 CCDC144CPQ8IYA2 1237 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 GOLIM4O00461 696 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.11■□□□□ 0.33
C12orf49-201ENST00000261318 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
C12orf49-201ENST00000261318 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
C12orf49-201ENST00000261318 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 CETN1Q12798 172 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 DZIP1Q86YF9 867 aaKnown RBP17.1■□□□□ 0.33
C12orf49-201ENST00000261318 ZNF444Q8N0Y2 327 aaPredicted RBP17.1■□□□□ 0.33
C12orf49-201ENST00000261318 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
C12orf49-201ENST00000261318 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
C12orf49-201ENST00000261318 DNAI1Q9UI46 699 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 N4BP3O15049 544 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 MCM6Q14566 821 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 SRRTQ9BXP5 876 aaKnown RBP17.1■□□□□ 0.33
C12orf49-201ENST00000261318 IFI16Q16666 785 aaKnown RBP17.1■□□□□ 0.33
C12orf49-201ENST00000261318 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 MICU3Q86XE3 530 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
C12orf49-201ENST00000261318 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
C12orf49-201ENST00000261318 CCDC40Q4G0X9 1142 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 MAP3K2Q9Y2U5 619 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 NCOA7Q8NI08 942 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
C12orf49-201ENST00000261318 DISP3Q9P2K9 1392 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 TUBB4AP04350 444 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 WAPLQ7Z5K2 1190 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 CCDC94Q9BW85 323 aaPredicted RBP17.09■□□□□ 0.33
C12orf49-201ENST00000261318 DNAI2Q9GZS0 605 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 RMND1Q9NWS8 449 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 CTAGE9A4FU28 777 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 KIF5BP33176 963 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 GTF2A1P52655 376 aaPredicted RBP17.09■□□□□ 0.33
C12orf49-201ENST00000261318 NME9Q86XW9 330 aa17.09■□□□□ 0.33
C12orf49-201ENST00000261318 HSPA4P34932 840 aa17.08■□□□□ 0.33
C12orf49-201ENST00000261318 UBA7P41226 1012 aa17.08■□□□□ 0.33
C12orf49-201ENST00000261318 PCDHB15Q9Y5E8 787 aa17.08■□□□□ 0.33
C12orf49-201ENST00000261318 EMILIN1Q9Y6C2 1016 aa17.08■□□□□ 0.33
C12orf49-201ENST00000261318 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
C12orf49-201ENST00000261318 SLU7O95391 586 aaKnown RBP17.08■□□□□ 0.32
C12orf49-201ENST00000261318 CEP63Q96MT8 703 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 FSD2A1L4K1 749 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 CTAGE15A4D2H0 777 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 CTAGE8P0CG41 777 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 CTAGE6Q86UF2 777 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 CTAGE4Q8IX94 777 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.32
C12orf49-201ENST00000261318 CTNNA2P26232 953 aa17.08■□□□□ 0.32
C12orf49-201ENST00000261318 TTC21BQ7Z4L5 1316 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 SLC26A6Q9BXS9 759 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 NECAB1Q8N987 351 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 ESYT1Q9BSJ8 1104 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 SYT1P21579 422 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 CYLC1P35663 651 aaPredicted RBP17.07■□□□□ 0.32
C12orf49-201ENST00000261318 TRIM47Q96LD4 638 aa17.07■□□□□ 0.32
C12orf49-201ENST00000261318 TCERG1LQ5VWI1 586 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 PIP4K2BP78356 416 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 PPP4R3AQ6IN85 833 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 BICDL1Q6ZP65 573 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 TUBB4BP68371 445 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 AOPEPQ8N6M6 819 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 F13A1P00488 732 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 ZC3H6P61129 1189 aaKnown RBP17.06■□□□□ 0.32
C12orf49-201ENST00000261318 CUL5Q93034 780 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 EXOC1Q9NV70 894 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 DACT1Q9NYF0 836 aa17.06■□□□□ 0.32
C12orf49-201ENST00000261318 TMOD3Q9NYL9 352 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms