RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 C5P01031 1676 aa12.94□□□□□ -0.34
CHRNA1-201ENST00000261007 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
CHRNA1-201ENST00000261007 GRM8O00222 908 aa12.94□□□□□ -0.34
CHRNA1-201ENST00000261007 CCDC183Q5T5S1 534 aa12.94□□□□□ -0.34
CHRNA1-201ENST00000261007 GPATCH3Q96I76 525 aa12.94□□□□□ -0.34
CHRNA1-201ENST00000261007 PCDH11XQ9BZA7 1347 aa12.93□□□□□ -0.34
CHRNA1-201ENST00000261007 PCDH11YQ9BZA8 1340 aa12.93□□□□□ -0.34
CHRNA1-201ENST00000261007 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
CHRNA1-201ENST00000261007 ANXA1P04083 346 aa12.93□□□□□ -0.34
CHRNA1-201ENST00000261007 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
CHRNA1-201ENST00000261007 CABLES1Q8TDN4 633 aa12.93□□□□□ -0.34
CHRNA1-201ENST00000261007 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
CHRNA1-201ENST00000261007 CHMLP26374 656 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 CABP4P57796 275 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 PDIA6Q15084 440 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 RIC3Q7Z5B4 369 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 CNTROBQ8N137 903 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 CHAMP1Q96JM3 812 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 SLAIN2Q9P270 581 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 COL15A1P39059 1388 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 CYP27B1O15528 508 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 ADCY5O95622 1261 aa12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
CHRNA1-201ENST00000261007 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
CHRNA1-201ENST00000261007 GLRX3O76003 335 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-201ENST00000261007 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
CHRNA1-201ENST00000261007 RILPL2Q969X0 211 aa12.91□□□□□ -0.34
CHRNA1-201ENST00000261007 METTL22Q9BUU2 404 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-201ENST00000261007 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-201ENST00000261007 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 KDM4AO75164 1064 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 FOXD4L5Q5VV16 416 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 ZCRB1Q8TBF4 217 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 USP25Q9UHP3 1055 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 NHSL1Q5SYE7 1610 aa12.9□□□□□ -0.34
CHRNA1-201ENST00000261007 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 GADD45BO75293 160 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 NKX1-1Q15270 411 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 TOM1L2Q6ZVM7 507 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 PI4K2BQ8TCG2 481 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 ANKRD7Q92527 254 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 ARID3AQ99856 593 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 NEURL1BA8MQ27 555 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 CWF19L2Q2TBE0 894 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 PDCL2Q8N4E4 241 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 KIAA1524Q8TCG1 905 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 XAGE3Q8WTP9 111 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 RUFY2Q8WXA3 655 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 FEZ1Q99689 392 aa12.89□□□□□ -0.35
CHRNA1-201ENST00000261007 CTIFO43310 598 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 IL2RBP14784 551 aa12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 UBE2HP62256 183 aa12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 CBX1P83916 185 aa12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 G3BP1Q13283 466 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 SYCP1Q15431 976 aa12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 ZNF830Q96NB3 372 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 TTC12Q9H892 705 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-201ENST00000261007 UBR2Q8IWV8 1755 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 GCKRQ14397 625 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 ATP2B3Q16720 1220 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 TAF3Q5VWG9 929 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 SUCLG2Q96I99 432 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 ANO2Q9NQ90 1003 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 ECHDC1Q9NTX5 307 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 HIP1O00291 1037 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 IGKV5-2P06315 115 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 FUCA2Q9BTY2 467 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 PAPPAQ13219 1627 aa12.87□□□□□ -0.35
CHRNA1-201ENST00000261007 GLI3P10071 1580 aa12.86□□□□□ -0.35
CHRNA1-201ENST00000261007 MYL6BP14649 208 aa12.86□□□□□ -0.35
CHRNA1-201ENST00000261007 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
CHRNA1-201ENST00000261007 ZNF335Q9H4Z2 1342 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-201ENST00000261007 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 TSC1Q92574 1164 aa12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 MYD88Q99836 296 aa12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms