RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 C3orf67Q6ZVT6 689 aa22.08■■□□□ 1.13
CGREF1-201ENST00000260595 PPP1R42Q7Z4L9 355 aa22.08■■□□□ 1.13
CGREF1-201ENST00000260595 ZNF277Q9NRM2 450 aaPredicted RBP22.08■■□□□ 1.13
CGREF1-201ENST00000260595 LAS1LQ9Y4W2 734 aaKnown RBP22.08■■□□□ 1.13
CGREF1-201ENST00000260595 XAGE3Q8WTP9 111 aa22.07■■□□□ 1.12
CGREF1-201ENST00000260595 DDX21Q9NR30 783 aaKnown RBP eCLIP22.07■■□□□ 1.12
CGREF1-201ENST00000260595 SLC10A5Q5PT55 438 aa22.06■■□□□ 1.12
CGREF1-201ENST00000260595 SYNE4Q8N205 404 aa22.06■■□□□ 1.12
CGREF1-201ENST00000260595 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
CGREF1-201ENST00000260595 RPGRQ92834 1020 aaKnown RBP22.05■■□□□ 1.12
CGREF1-201ENST00000260595 CFAP44Q96MT7 982 aa22.05■■□□□ 1.12
CGREF1-201ENST00000260595 CRAMP1Q96RY5 1269 aa22.05■■□□□ 1.12
CGREF1-201ENST00000260595 PSMD1Q99460 953 aa22.05■■□□□ 1.12
CGREF1-201ENST00000260595 UTP14AQ9BVJ6 771 aaKnown RBP22.05■■□□□ 1.12
CGREF1-201ENST00000260595 CC2D2BQ6DHV5 1058 aa22.04■■□□□ 1.12
CGREF1-201ENST00000260595 L3MBTL3Q96JM7 780 aaPredicted RBP22.04■■□□□ 1.12
CGREF1-201ENST00000260595 HOXB7P09629 217 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 ZNF853P0CG23 659 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 IARSP41252 1262 aaKnown RBP22.03■■□□□ 1.12
CGREF1-201ENST00000260595 TCIRG1Q13488 830 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 SLC51AQ86UW1 340 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 NLRP10Q86W26 655 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 KLRG1Q96E93 195 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 RBM17Q96I25 401 aaKnown RBP22.03■■□□□ 1.12
CGREF1-201ENST00000260595 CHPF2Q9P2E5 772 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 ZNF541Q9H0D2 1346 aa22.03■■□□□ 1.12
CGREF1-201ENST00000260595 FZD9O00144 591 aa22.02■■□□□ 1.12
CGREF1-201ENST00000260595 APAF1O14727 1248 aa22.02■■□□□ 1.12
CGREF1-201ENST00000260595 HSP90AB3PQ58FF7 597 aa22.02■■□□□ 1.12
CGREF1-201ENST00000260595 NLRP3Q96P20 1036 aa22.02■■□□□ 1.12
CGREF1-201ENST00000260595 POTEIP0CG38 1075 aa22.01■■□□□ 1.11
CGREF1-201ENST00000260595 POTEJP0CG39 1038 aa22.01■■□□□ 1.11
CGREF1-201ENST00000260595 HDGFL1Q5TGJ6 251 aa22.01■■□□□ 1.11
CGREF1-201ENST00000260595 MBIPQ9NS73 344 aa22.01■■□□□ 1.11
CGREF1-201ENST00000260595 RNF123Q5XPI4 1314 aa22.01■■□□□ 1.11
CGREF1-201ENST00000260595 PPEF1O14829 653 aaPredicted RBP22■■□□□ 1.11
CGREF1-201ENST00000260595 JMYQ8N9B5 988 aa22■■□□□ 1.11
CGREF1-201ENST00000260595 IQCA1LA6NCM1 817 aa21.99■■□□□ 1.11
CGREF1-201ENST00000260595 GRIPAP1Q4V328 841 aa21.99■■□□□ 1.11
CGREF1-201ENST00000260595 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
CGREF1-201ENST00000260595 CHADLQ6NUI6 762 aa21.99■■□□□ 1.11
CGREF1-201ENST00000260595 TAF1DQ9H5J8 278 aaPredicted RBP21.99■■□□□ 1.11
CGREF1-201ENST00000260595 DBF4Q9UBU7 674 aaPredicted RBP21.99■■□□□ 1.11
CGREF1-201ENST00000260595 PLBD2Q8NHP8 589 aa21.98■■□□□ 1.11
CGREF1-201ENST00000260595 COL4A5P29400 1685 aa21.98■■□□□ 1.11
CGREF1-201ENST00000260595 TCERG1O14776 1098 aaKnown RBP21.97■■□□□ 1.11
CGREF1-201ENST00000260595 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
CGREF1-201ENST00000260595 ANKRD13DQ6ZTN6 518 aa21.97■■□□□ 1.11
CGREF1-201ENST00000260595 ABCC4O15439 1325 aa21.97■■□□□ 1.11
CGREF1-201ENST00000260595 CCDC184Q52MB2 194 aa21.96■■□□□ 1.11
CGREF1-201ENST00000260595 IFT57Q9NWB7 429 aa21.96■■□□□ 1.11
CGREF1-201ENST00000260595 TRMT112Q9UI30 125 aaKnown RBP21.96■■□□□ 1.11
CGREF1-201ENST00000260595 ATP6V0A2Q9Y487 856 aa21.96■■□□□ 1.11
CGREF1-201ENST00000260595 ANKRD36CQ5JPF3 1778 aa21.95■■□□□ 1.1
CGREF1-201ENST00000260595 JDP2Q8WYK2 163 aa21.95■■□□□ 1.1
CGREF1-201ENST00000260595 ISCA1Q9BUE6 129 aa21.95■■□□□ 1.1
CGREF1-201ENST00000260595 HYPKQ9NX55 129 aa21.95■■□□□ 1.1
CGREF1-201ENST00000260595 SH3TC1Q8TE82 1336 aa21.95■■□□□ 1.1
CGREF1-201ENST00000260595 GNAI1P63096 354 aa21.94■■□□□ 1.1
CGREF1-201ENST00000260595 LDHDQ86WU2 507 aa21.94■■□□□ 1.1
CGREF1-201ENST00000260595 GPC2Q8N158 579 aa21.94■■□□□ 1.1
CGREF1-201ENST00000260595 HACL1Q9UJ83 578 aa21.94■■□□□ 1.1
CGREF1-201ENST00000260595 BBOX1O75936 387 aa21.93■■□□□ 1.1
CGREF1-201ENST00000260595 SCN4AP35499 1836 aa21.93■■□□□ 1.1
CGREF1-201ENST00000260595 CALD1Q05682 793 aaKnown RBP21.93■■□□□ 1.1
CGREF1-201ENST00000260595 ZNF428Q96B54 188 aa21.93■■□□□ 1.1
CGREF1-201ENST00000260595 IFFO2Q5TF58 517 aa21.92■■□□□ 1.1
CGREF1-201ENST00000260595 LARGE2Q8N3Y3 721 aa21.92■■□□□ 1.1
CGREF1-201ENST00000260595 ATP5J2-PTCD1G3V325 749 aa21.91■■□□□ 1.1
CGREF1-201ENST00000260595 EPHX2P34913 555 aa21.91■■□□□ 1.1
CGREF1-201ENST00000260595 EIF6P56537 245 aaKnown RBP21.91■■□□□ 1.1
CGREF1-201ENST00000260595 SP8Q8IXZ3 490 aa21.91■■□□□ 1.1
CGREF1-201ENST00000260595 RTFDC1Q9BY42 306 aaPredicted RBP21.91■■□□□ 1.1
CGREF1-201ENST00000260595 PASKQ96RG2 1323 aa21.9■■□□□ 1.1
CGREF1-201ENST00000260595 ELL2O00472 640 aaPredicted RBP21.9■■□□□ 1.1
CGREF1-201ENST00000260595 TRIM28Q13263 835 aaKnown RBP21.9■■□□□ 1.1
CGREF1-201ENST00000260595 GRAPQ13588 217 aa21.9■■□□□ 1.1
CGREF1-201ENST00000260595 C8orf58Q8NAV2 365 aa21.9■■□□□ 1.1
CGREF1-201ENST00000260595 GRAPLQ8TC17 118 aaPredicted RBP21.9■■□□□ 1.1
CGREF1-201ENST00000260595 FAM89AQ96GI7 184 aa21.9■■□□□ 1.1
CGREF1-201ENST00000260595 VPS33BQ9H267 617 aa21.9■■□□□ 1.1
CGREF1-201ENST00000260595 PHAXQ9H814 394 aaKnown RBP21.9■■□□□ 1.1
CGREF1-201ENST00000260595 LAMB2P55268 1798 aa21.89■■□□□ 1.1
CGREF1-201ENST00000260595 ITGBL1O95965 494 aaPredicted RBP21.89■■□□□ 1.09
CGREF1-201ENST00000260595 EAPPQ56P03 285 aaPredicted RBP21.89■■□□□ 1.09
CGREF1-201ENST00000260595 DDX46Q7L014 1031 aaKnown RBP21.89■■□□□ 1.09
CGREF1-201ENST00000260595 TMX4Q9H1E5 349 aaPredicted RBP21.89■■□□□ 1.09
CGREF1-201ENST00000260595 CREBZFQ9NS37 354 aa21.89■■□□□ 1.09
CGREF1-201ENST00000260595 PPIP5K2O43314 1243 aa21.88■■□□□ 1.09
CGREF1-201ENST00000260595 AOC3Q16853 763 aa21.88■■□□□ 1.09
CGREF1-201ENST00000260595 PNMA8AQ86V59 439 aaPredicted RBP21.88■■□□□ 1.09
CGREF1-201ENST00000260595 GJA3Q9Y6H8 435 aa21.88■■□□□ 1.09
CGREF1-201ENST00000260595 ADAMTSL1Q8N6G6 1762 aa21.88■■□□□ 1.09
CGREF1-201ENST00000260595 SF3B3Q15393 1217 aaKnown RBP21.87■■□□□ 1.09
CGREF1-201ENST00000260595 NIM1KQ8IY84 436 aa21.87■■□□□ 1.09
CGREF1-201ENST00000260595 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
CGREF1-201ENST00000260595 SCNN1DP51172 638 aa21.86■■□□□ 1.09
CGREF1-201ENST00000260595 DPP8Q6V1X1 898 aaPredicted RBP21.86■■□□□ 1.09
CGREF1-201ENST00000260595 MPNDQ8N594 471 aa21.86■■□□□ 1.09
CGREF1-201ENST00000260595 SUPT20HQ8NEM7 779 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms