RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 AP1ARQ63HQ0 302 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 NME9Q86XW9 330 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 MMTAG2Q9BU76 263 aaKnown RBP12.74□□□□□ -0.37
GCM1-201ENST00000259803 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 JADE2Q9NQC1 790 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 BDNFP23560 247 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 MCM5P33992 734 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 IQCF2Q8IXL9 164 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
GCM1-201ENST00000259803 PSME1Q06323 249 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 PHC3Q8NDX5 983 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 TMCO5BA8MYB1 307 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
GCM1-201ENST00000259803 ANKRD20A12PQ8NF67 263 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 AGBL1Q96MI9 1066 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 MYOM1P52179 1685 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
GCM1-201ENST00000259803 CDC42BPGQ6DT37 1551 aa12.72□□□□□ -0.37
GCM1-201ENST00000259803 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
GCM1-201ENST00000259803 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
GCM1-201ENST00000259803 C17orf50Q8WW18 174 aa12.72□□□□□ -0.37
GCM1-201ENST00000259803 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
GCM1-201ENST00000259803 KTN1Q86UP2 1357 aaKnown RBP12.72□□□□□ -0.37
GCM1-201ENST00000259803 ADGRB2O60241 1585 aa12.72□□□□□ -0.37
GCM1-201ENST00000259803 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
GCM1-201ENST00000259803 IGHDP01880 384 aa12.71□□□□□ -0.37
GCM1-201ENST00000259803 TSNAXIP1Q2TAA8 658 aa12.71□□□□□ -0.37
GCM1-201ENST00000259803 TTC30BQ8N4P2 665 aa12.71□□□□□ -0.37
GCM1-201ENST00000259803 SMCR8Q8TEV9 937 aaPredicted RBP12.71□□□□□ -0.37
GCM1-201ENST00000259803 FMN2Q9NZ56 1722 aa12.71□□□□□ -0.37
GCM1-201ENST00000259803 TRPC1P48995 793 aa12.71□□□□□ -0.38
GCM1-201ENST00000259803 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.38
GCM1-201ENST00000259803 ZNF662Q6ZS27 426 aa12.71□□□□□ -0.38
GCM1-201ENST00000259803 AMOTL1Q8IY63 956 aa12.71□□□□□ -0.38
GCM1-201ENST00000259803 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.38
GCM1-201ENST00000259803 POLR3CQ9BUI4 534 aaPredicted RBP12.71□□□□□ -0.38
GCM1-201ENST00000259803 CPSF2Q9P2I0 782 aaKnown RBP12.71□□□□□ -0.38
GCM1-201ENST00000259803 NOL7Q9UMY1 257 aaKnown RBP12.71□□□□□ -0.38
GCM1-201ENST00000259803 KIF5CO60282 957 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 NAT2P11245 290 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 MCM6Q14566 821 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 E2F5Q15329 346 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 RETREG1Q9H6L5 497 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.7□□□□□ -0.38
GCM1-201ENST00000259803 COMMD10Q9Y6G5 202 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
GCM1-201ENST00000259803 BLOC1S6Q9UL45 172 aa12.7□□□□□ -0.38
GCM1-201ENST00000259803 PLEKHG3A1L390 1219 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
GCM1-201ENST00000259803 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 SUGP1Q8IWZ8 645 aaKnown RBP12.69□□□□□ -0.38
GCM1-201ENST00000259803 IQSEC3Q9UPP2 1182 aaPredicted RBP12.69□□□□□ -0.38
GCM1-201ENST00000259803 EP400Q96L91 3159 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 TIMM44O43615 452 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 TOM1O60784 492 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 CAPN15O75808 1086 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
GCM1-201ENST00000259803 NRBP1Q9UHY1 535 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 UNCXA6NJT0 531 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 FYB1O15117 783 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 MYBL2P10244 700 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 RWDD2BP57060 319 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 TSGA10IPQ3SY00 556 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 HDGFL2Q7Z4V5 671 aaPredicted RBP12.69□□□□□ -0.38
GCM1-201ENST00000259803 TAX1BP1Q86VP1 789 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 SAMD3Q8N6K7 520 aa12.69□□□□□ -0.38
GCM1-201ENST00000259803 TACO1Q9BSH4 297 aaKnown RBP12.69□□□□□ -0.38
GCM1-201ENST00000259803 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 CSB-PGBD3P0DP91 1061 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 GYS2P54840 703 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 HNRNPH2P55795 449 aaKnown RBP12.68□□□□□ -0.38
GCM1-201ENST00000259803 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
GCM1-201ENST00000259803 SART3Q15020 963 aaKnown RBP12.68□□□□□ -0.38
GCM1-201ENST00000259803 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
GCM1-201ENST00000259803 TTC19Q6DKK2 380 aaPredicted RBP12.68□□□□□ -0.38
GCM1-201ENST00000259803 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 ANKRD36BQ8N2N9 1353 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 ABTB2Q8N961 1025 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 SRCAPQ6ZRS2 3230 aa12.68□□□□□ -0.38
GCM1-201ENST00000259803 CPSF1Q10570 1443 aaKnown RBP12.67□□□□□ -0.38
GCM1-201ENST00000259803 PSMD2Q13200 908 aa12.67□□□□□ -0.38
GCM1-201ENST00000259803 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
GCM1-201ENST00000259803 GJC2Q5T442 439 aaPredicted RBP12.67□□□□□ -0.38
GCM1-201ENST00000259803 RSPH1Q8WYR4 309 aa12.67□□□□□ -0.38
GCM1-201ENST00000259803 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
GCM1-201ENST00000259803 NBPF7P0C2Y1 421 aaPredicted RBP12.67□□□□□ -0.38
GCM1-201ENST00000259803 IMPDH2P12268 514 aa12.67□□□□□ -0.38
GCM1-201ENST00000259803 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
GCM1-201ENST00000259803 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.38
GCM1-201ENST00000259803 NFXL1Q6ZNB6 911 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms