RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
THSD1-201ENST00000258613 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
THSD1-201ENST00000258613 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.13
THSD1-201ENST00000258613 TAF6LQ9Y6J9 622 aa15.89■□□□□ 0.13
THSD1-201ENST00000258613 NCLP19338 710 aaKnown RBP15.89■□□□□ 0.13
THSD1-201ENST00000258613 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
THSD1-201ENST00000258613 GAS2L3Q86XJ1 694 aa15.89■□□□□ 0.13
THSD1-201ENST00000258613 PLBD2Q8NHP8 589 aa15.89■□□□□ 0.13
THSD1-201ENST00000258613 TCEANC2Q96MN5 208 aa15.89■□□□□ 0.13
THSD1-201ENST00000258613 DBNLQ9UJU6 430 aaKnown RBP15.89■□□□□ 0.13
THSD1-201ENST00000258613 XRCC6P12956 609 aaKnown RBP eCLIP15.88■□□□□ 0.13
THSD1-201ENST00000258613 NMIQ13287 307 aaPredicted RBP15.88■□□□□ 0.13
THSD1-201ENST00000258613 KIAA1211Q6ZU35 1233 aa15.88■□□□□ 0.13
THSD1-201ENST00000258613 TTC41PQ6P2S7 1318 aa15.88■□□□□ 0.13
THSD1-201ENST00000258613 RAD50Q92878 1312 aa15.88■□□□□ 0.13
THSD1-201ENST00000258613 A0A0D9SFI3 127 aa15.88■□□□□ 0.13
THSD1-201ENST00000258613 PKD1L3Q7Z443 1732 aa15.88■□□□□ 0.13
THSD1-201ENST00000258613 ERC1Q8IUD2 1116 aa15.87■□□□□ 0.13
THSD1-201ENST00000258613 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
THSD1-201ENST00000258613 PIGBQ92521 554 aa15.87■□□□□ 0.13
THSD1-201ENST00000258613 DBNDD2Q9BQY9 259 aa15.87■□□□□ 0.13
THSD1-201ENST00000258613 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
THSD1-201ENST00000258613 CASP7P55210 303 aa15.87■□□□□ 0.13
THSD1-201ENST00000258613 DNAJC2Q99543 621 aaKnown RBP15.87■□□□□ 0.13
THSD1-201ENST00000258613 FSD1Q9BTV5 496 aa15.87■□□□□ 0.13
THSD1-201ENST00000258613 CYP2E1P05181 493 aaPredicted RBP15.86■□□□□ 0.13
THSD1-201ENST00000258613 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
THSD1-201ENST00000258613 TIMM10P62072 90 aa15.86■□□□□ 0.13
THSD1-201ENST00000258613 TMOD3Q9NYL9 352 aa15.86■□□□□ 0.13
THSD1-201ENST00000258613 USP42Q9H9J4 1324 aaKnown RBP15.86■□□□□ 0.13
THSD1-201ENST00000258613 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
THSD1-201ENST00000258613 LARGE1O95461 756 aa15.86■□□□□ 0.13
THSD1-201ENST00000258613 ZNF589Q86UQ0 364 aaPredicted RBP15.86■□□□□ 0.13
THSD1-201ENST00000258613 SEC62Q99442 399 aaKnown RBP15.86■□□□□ 0.13
THSD1-201ENST00000258613 MRC1P22897 1456 aa15.86■□□□□ 0.13
THSD1-201ENST00000258613 GOLGA6L3A6NEY3 463 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 AK2P54819 239 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 FOXO4P98177 505 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 GPATCH3Q96I76 525 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 NEUROD6Q96NK8 337 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 PUS3Q9BZE2 481 aaKnown RBP15.85■□□□□ 0.13
THSD1-201ENST00000258613 DDX49Q9Y6V7 483 aaKnown RBP15.85■□□□□ 0.13
THSD1-201ENST00000258613 GLI3P10071 1580 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 ADAMTS2O95450 1211 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 CCDC129Q6ZRS4 1044 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 GDPD2Q9HCC8 539 aa15.85■□□□□ 0.13
THSD1-201ENST00000258613 TNNI3KQ59H18 835 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 EVI5LQ96CN4 794 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 NSFL1CQ9UNZ2 370 aaKnown RBP15.84■□□□□ 0.13
THSD1-201ENST00000258613 FPGT-TNNI3KV9GXZ4 949 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 KCNJ4P48050 445 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
THSD1-201ENST00000258613 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 JAKMIP1Q96N16 626 aaKnown RBP15.84■□□□□ 0.13
THSD1-201ENST00000258613 HDAC5Q9UQL6 1122 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 ARFGEF2Q9Y6D5 1785 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 GPTP24298 496 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 ANAPC15P60006 121 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 RUFY3Q7L099 469 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 COPRSQ9NQ92 184 aa15.84■□□□□ 0.13
THSD1-201ENST00000258613 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
THSD1-201ENST00000258613 NUCB2P80303 420 aa15.83■□□□□ 0.12
THSD1-201ENST00000258613 A0A0U1RQG5 324 aaPredicted RBP15.83■□□□□ 0.12
THSD1-201ENST00000258613 NKX1-1Q15270 411 aaPredicted RBP15.83■□□□□ 0.12
THSD1-201ENST00000258613 CWC25Q9NXE8 425 aaPredicted RBP15.83■□□□□ 0.12
THSD1-201ENST00000258613 RABL6Q3YEC7 729 aaPredicted RBP15.82■□□□□ 0.12
THSD1-201ENST00000258613 SLC4A9Q96Q91 983 aa15.82■□□□□ 0.12
THSD1-201ENST00000258613 RBM8AQ9Y5S9 174 aaKnown RBP15.82■□□□□ 0.12
THSD1-201ENST00000258613 FSD2A1L4K1 749 aa15.82■□□□□ 0.12
THSD1-201ENST00000258613 H7C1W4 665 aa15.82■□□□□ 0.12
THSD1-201ENST00000258613 ATG3Q9NT62 314 aa15.82■□□□□ 0.12
THSD1-201ENST00000258613 LMBRD1Q9NUN5 540 aa15.82■□□□□ 0.12
THSD1-201ENST00000258613 TCHHQ07283 1943 aa15.82■□□□□ 0.12
THSD1-201ENST00000258613 GLIPR1L2Q4G1C9 344 aa15.81■□□□□ 0.12
THSD1-201ENST00000258613 CAVIN1Q6NZI2 390 aaKnown RBP15.81■□□□□ 0.12
THSD1-201ENST00000258613 HLFQ16534 295 aa15.81■□□□□ 0.12
THSD1-201ENST00000258613 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
THSD1-201ENST00000258613 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
THSD1-201ENST00000258613 KCPQ6ZWJ8 1503 aa15.81■□□□□ 0.12
THSD1-201ENST00000258613 CUL4AQ13619 759 aa15.81■□□□□ 0.12
THSD1-201ENST00000258613 NECAB1Q8N987 351 aa15.81■□□□□ 0.12
THSD1-201ENST00000258613 TTC14Q96N46 770 aa15.81■□□□□ 0.12
THSD1-201ENST00000258613 CCDC171Q6TFL3 1326 aa15.8■□□□□ 0.12
THSD1-201ENST00000258613 SHANK3Q9BYB0 1731 aa15.8■□□□□ 0.12
THSD1-201ENST00000258613 RUFY2Q8WXA3 655 aa15.8■□□□□ 0.12
THSD1-201ENST00000258613 GOLGA6L22H0YM25 854 aa15.79■□□□□ 0.12
THSD1-201ENST00000258613 COL15A1P39059 1388 aa15.79■□□□□ 0.12
THSD1-201ENST00000258613 NUTM2BA6NNL0 878 aaPredicted RBP15.79■□□□□ 0.12
THSD1-201ENST00000258613 NUTM2EB1AL46 878 aaPredicted RBP15.79■□□□□ 0.12
THSD1-201ENST00000258613 NECTIN1Q15223 517 aa15.79■□□□□ 0.12
THSD1-201ENST00000258613 CREB3L3Q68CJ9 461 aa15.79■□□□□ 0.12
THSD1-201ENST00000258613 NUTM2AQ8IVF1 878 aaPredicted RBP15.79■□□□□ 0.12
THSD1-201ENST00000258613 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
THSD1-201ENST00000258613 GPT2Q8TD30 523 aa15.79■□□□□ 0.12
THSD1-201ENST00000258613 ABCA3Q99758 1704 aa15.79■□□□□ 0.12
THSD1-201ENST00000258613 PARP4Q9UKK3 1724 aaKnown RBP15.79■□□□□ 0.12
THSD1-201ENST00000258613 ACSBG1Q96GR2 724 aa15.78■□□□□ 0.12
THSD1-201ENST00000258613 SNRKQ9NRH2 765 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms