RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 PDCP20941 246 aa17.46■□□□□ 0.39
CAB39-201ENST00000258418 SIRT1Q96EB6 747 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 NUP62CLQ9H1M0 184 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 GOLGA6L6A8MZA4 724 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 CCDC144CPQ8IYA2 1237 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 DEPDC5O75140 1603 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 FSD2A1L4K1 749 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 SLFNL1Q499Z3 407 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 DDX21Q9NR30 783 aaKnown RBP eCLIP17.45■□□□□ 0.38
CAB39-201ENST00000258418 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
CAB39-201ENST00000258418 ZC3H13Q5T200 1668 aaKnown RBP17.44■□□□□ 0.38
CAB39-201ENST00000258418 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
CAB39-201ENST00000258418 IBTKQ9P2D0 1353 aaPredicted RBP17.44■□□□□ 0.38
CAB39-201ENST00000258418 NUTM2BA6NNL0 878 aaPredicted RBP17.44■□□□□ 0.38
CAB39-201ENST00000258418 NUTM2EB1AL46 878 aaPredicted RBP17.44■□□□□ 0.38
CAB39-201ENST00000258418 ADCY5O95622 1261 aa17.44■□□□□ 0.38
CAB39-201ENST00000258418 FILIP1Q7Z7B0 1213 aa17.44■□□□□ 0.38
CAB39-201ENST00000258418 NUTM2AQ8IVF1 878 aaPredicted RBP17.44■□□□□ 0.38
CAB39-201ENST00000258418 UQCRHLA0A096LP55 91 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 UQCRHP07919 91 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 CCDC158Q5M9N0 1113 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 CCDC192P0DO97 292 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 ANAPC15P60006 121 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 CCDC183Q5T5S1 534 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 ISM2Q6H9L7 571 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 ZSCAN31Q96LW9 406 aaPredicted RBP17.43■□□□□ 0.38
CAB39-201ENST00000258418 A0A0D9SFI3 127 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 ALDH1L1O75891 902 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 LARGE1O95461 756 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 F13A1P00488 732 aa17.43■□□□□ 0.38
CAB39-201ENST00000258418 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
CAB39-201ENST00000258418 CHGBP05060 677 aa17.42■□□□□ 0.38
CAB39-201ENST00000258418 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
CAB39-201ENST00000258418 KIAA1210Q9ULL0 1709 aa17.42■□□□□ 0.38
CAB39-201ENST00000258418 POLR3DP05423 398 aaPredicted RBP17.42■□□□□ 0.38
CAB39-201ENST00000258418 HSPA4P34932 840 aa17.42■□□□□ 0.38
CAB39-201ENST00000258418 KIF6Q6ZMV9 814 aa17.42■□□□□ 0.38
CAB39-201ENST00000258418 NEK1Q96PY6 1258 aa17.42■□□□□ 0.38
CAB39-201ENST00000258418 IQSEC3Q9UPP2 1182 aaPredicted RBP17.42■□□□□ 0.38
CAB39-201ENST00000258418 PPLO60437 1756 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 CCDC171Q6TFL3 1326 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 RAD50Q92878 1312 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 SYNE3Q6ZMZ3 975 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 PLEKHG1Q9ULL1 1385 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 RUFY3Q7L099 469 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 Q6ZUG5 572 aa17.41■□□□□ 0.38
CAB39-201ENST00000258418 COL3A1P02461 1466 aaPredicted RBP17.4■□□□□ 0.38
CAB39-201ENST00000258418 JAK2O60674 1132 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 KINO60870 393 aaKnown RBP17.4■□□□□ 0.38
CAB39-201ENST00000258418 ADAMTS2O95450 1211 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 STK38Q15208 465 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 NCOA5Q9HCD5 579 aaKnown RBP17.4■□□□□ 0.38
CAB39-201ENST00000258418 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 NLRP1Q9C000 1473 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 ANKRD1Q15327 319 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 MAP3K11Q16584 847 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 DACT1Q9NYF0 836 aa17.4■□□□□ 0.38
CAB39-201ENST00000258418 MAP2P11137 1827 aaKnown RBP17.4■□□□□ 0.38
CAB39-201ENST00000258418 BIN1O00499 593 aa17.39■□□□□ 0.37
CAB39-201ENST00000258418 BRD1O95696 1058 aa17.39■□□□□ 0.37
CAB39-201ENST00000258418 ERCC4Q92889 916 aaPredicted RBP17.39■□□□□ 0.37
CAB39-201ENST00000258418 TMOD3Q9NYL9 352 aa17.39■□□□□ 0.37
CAB39-201ENST00000258418 RXRAP19793 462 aa17.39■□□□□ 0.37
CAB39-201ENST00000258418 APOBRQ0VD83 1088 aa17.39■□□□□ 0.37
CAB39-201ENST00000258418 ME3Q16798 604 aa17.39■□□□□ 0.37
CAB39-201ENST00000258418 SH2B1Q9NRF2 756 aaPredicted RBP17.39■□□□□ 0.37
CAB39-201ENST00000258418 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
CAB39-201ENST00000258418 C19orf44Q9H6X5 657 aa17.38■□□□□ 0.37
CAB39-201ENST00000258418 CLTCQ00610 1675 aaKnown RBP17.38■□□□□ 0.37
CAB39-201ENST00000258418 UBE2HP62256 183 aa17.38■□□□□ 0.37
CAB39-201ENST00000258418 GCKRQ14397 625 aa17.38■□□□□ 0.37
CAB39-201ENST00000258418 OTUD7BQ6GQQ9 843 aa17.38■□□□□ 0.37
CAB39-201ENST00000258418 CWC25Q9NXE8 425 aaPredicted RBP17.38■□□□□ 0.37
CAB39-201ENST00000258418 SLC27A2O14975 620 aa17.38■□□□□ 0.37
CAB39-201ENST00000258418 VPS37DQ86XT2 251 aa17.38■□□□□ 0.37
CAB39-201ENST00000258418 CDC37L1Q7L3B6 337 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 EPHA10Q5JZY3 1008 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 TBC1D2BQ9UPU7 963 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 ARHGEF28Q8N1W1 1705 aaKnown RBP17.37■□□□□ 0.37
CAB39-201ENST00000258418 MED14O60244 1454 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 AK9Q5TCS8 1911 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 SLC4A8Q2Y0W8 1093 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 LDHAL6AQ6ZMR3 332 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 ARHGEF25Q86VW2 580 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 ABCF2Q9UG63 623 aa17.37■□□□□ 0.37
CAB39-201ENST00000258418 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
CAB39-201ENST00000258418 OSBPL3Q9H4L5 887 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 TTC41PQ6P2S7 1318 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 ATP10DQ9P241 1426 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
CAB39-201ENST00000258418 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 SLC52A2Q9HAB3 445 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 CRB1P82279 1406 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 NEURL1BA8MQ27 555 aa17.36■□□□□ 0.37
CAB39-201ENST00000258418 CPLX2Q6PUV4 134 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms