RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 ZNF34Q8IZ26 560 aa11□□□□□ -0.65
TMEM258-201ENST00000257262 PHAXQ9H814 394 aaKnown RBP11□□□□□ -0.65
TMEM258-201ENST00000257262 HYPKQ9NX55 129 aa11□□□□□ -0.65
TMEM258-201ENST00000257262 ANKRD36CQ5JPF3 1778 aa11□□□□□ -0.65
TMEM258-201ENST00000257262 DLEC1Q9Y238 1755 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 TCERG1O14776 1098 aaKnown RBP10.99□□□□□ -0.65
TMEM258-201ENST00000257262 NPHP1O15259 732 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 GPTP24298 496 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 TPTE2Q6XPS3 522 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 NBPF5PQ86XG9 351 aaPredicted RBP10.99□□□□□ -0.65
TMEM258-201ENST00000257262 CNBD1Q8NA66 436 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 BRIP1Q9BX63 1249 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 CHMP4AQ9BY43 222 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 MYH16Q9H6N6 1097 aa10.99□□□□□ -0.65
TMEM258-201ENST00000257262 H0YIN7 160 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 GRIN3BO60391 1043 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 VAMP4O75379 141 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 PDE6BP35913 854 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 ST5P78524 1137 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 SUSD4Q5VX71 490 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 C2CD5Q86YS7 1000 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 PLBD2Q8NHP8 589 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 PIM2Q9P1W9 311 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 BCS1LQ9Y276 419 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 ATP10DQ9P241 1426 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 ARFGEF2Q9Y6D5 1785 aa10.98□□□□□ -0.65
TMEM258-201ENST00000257262 GTF2E1P29083 439 aaPredicted RBP10.97□□□□□ -0.65
TMEM258-201ENST00000257262 TCIRG1Q13488 830 aa10.97□□□□□ -0.65
TMEM258-201ENST00000257262 CHD4Q14839 1912 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 ARFGEF1Q9Y6D6 1849 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 COL11A2P13942 1736 aaPredicted RBP10.96□□□□□ -0.65
TMEM258-201ENST00000257262 SLFN5Q08AF3 891 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 HSP90AB3PQ58FF7 597 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 NUTM1Q86Y26 1132 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 STK31Q9BXU1 1019 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 NYXQ9GZU5 481 aa10.96□□□□□ -0.65
TMEM258-201ENST00000257262 CACNA1SQ13698 1873 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 E9PSI1 815 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 NTSR2O95665 410 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 PARP10Q53GL7 1025 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 DALRD3Q5D0E6 543 aaKnown RBP10.95□□□□□ -0.66
TMEM258-201ENST00000257262 G2E3Q7L622 706 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 NLRP10Q86W26 655 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 ZNF622Q969S3 477 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM258-201ENST00000257262 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
TMEM258-201ENST00000257262 TNRC6CQ9HCJ0 1690 aaKnown RBP10.95□□□□□ -0.66
TMEM258-201ENST00000257262 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
TMEM258-201ENST00000257262 SRGNP10124 158 aa10.94□□□□□ -0.66
TMEM258-201ENST00000257262 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
TMEM258-201ENST00000257262 TTLL6Q8N841 843 aa10.94□□□□□ -0.66
TMEM258-201ENST00000257262 ISCA1Q9BUE6 129 aa10.94□□□□□ -0.66
TMEM258-201ENST00000257262 UTP14AQ9BVJ6 771 aaKnown RBP10.94□□□□□ -0.66
TMEM258-201ENST00000257262 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
TMEM258-201ENST00000257262 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
TMEM258-201ENST00000257262 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
TMEM258-201ENST00000257262 KLRG2A4D1S0 409 aaPredicted RBP10.93□□□□□ -0.66
TMEM258-201ENST00000257262 DDX58O95786 925 aaKnown RBP10.93□□□□□ -0.66
TMEM258-201ENST00000257262 KSR2Q6VAB6 950 aa10.93□□□□□ -0.66
TMEM258-201ENST00000257262 ARHGAP27Q6ZUM4 889 aa10.93□□□□□ -0.66
TMEM258-201ENST00000257262 TRMT2AQ8IZ69 625 aaKnown RBP10.93□□□□□ -0.66
TMEM258-201ENST00000257262 ZNF784Q8NCA9 323 aaPredicted RBP10.93□□□□□ -0.66
TMEM258-201ENST00000257262 MASTLQ96GX5 879 aa10.93□□□□□ -0.66
TMEM258-201ENST00000257262 PHF12Q96QT6 1004 aa10.93□□□□□ -0.66
TMEM258-201ENST00000257262 MYD88Q99836 296 aa10.93□□□□□ -0.66
TMEM258-201ENST00000257262 TRMT112Q9UI30 125 aaKnown RBP10.93□□□□□ -0.66
TMEM258-201ENST00000257262 CACNA1FO60840 1977 aa10.93□□□□□ -0.66
TMEM258-201ENST00000257262 PI4KAP2A4QPH2 592 aa10.92□□□□□ -0.66
TMEM258-201ENST00000257262 SLC10A5Q5PT55 438 aa10.92□□□□□ -0.66
TMEM258-201ENST00000257262 STYK1Q6J9G0 422 aa10.92□□□□□ -0.66
TMEM258-201ENST00000257262 SYNE4Q8N205 404 aa10.92□□□□□ -0.66
TMEM258-201ENST00000257262 PI4KAP1Q8N8J0 262 aa10.92□□□□□ -0.66
TMEM258-201ENST00000257262 METTL22Q9BUU2 404 aaPredicted RBP10.92□□□□□ -0.66
TMEM258-201ENST00000257262 MAP3K2Q9Y2U5 619 aa10.92□□□□□ -0.66
TMEM258-201ENST00000257262 ADCY9O60503 1353 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 SLX4Q8IY92 1834 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 LAMB2P55268 1798 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 NPR1P16066 1061 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 HNRNPUQ00839 825 aaKnown RBP eCLIP10.91□□□□□ -0.66
TMEM258-201ENST00000257262 FLIIQ13045 1269 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
TMEM258-201ENST00000257262 CNKSR1Q969H4 720 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 FAM89AQ96GI7 184 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 NLRP3Q96P20 1036 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 RIC1Q4ADV7 1423 aa10.91□□□□□ -0.66
TMEM258-201ENST00000257262 GOLGB1Q14789 3259 aaKnown RBP10.9□□□□□ -0.66
TMEM258-201ENST00000257262 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
TMEM258-201ENST00000257262 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.66
TMEM258-201ENST00000257262 C21orf2O43822 256 aa10.9□□□□□ -0.66
TMEM258-201ENST00000257262 HCLS1P14317 486 aaPredicted RBP10.9□□□□□ -0.66
TMEM258-201ENST00000257262 ALDH1B1P30837 517 aa10.9□□□□□ -0.66
TMEM258-201ENST00000257262 FKBP5Q13451 457 aaPredicted RBP10.9□□□□□ -0.66
TMEM258-201ENST00000257262 CRY2Q49AN0 593 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms