RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
SORT1-201ENST00000256637 LDHCP07864 332 aa19.67■□□□□ 0.74
SORT1-201ENST00000256637 TAF12Q16514 161 aa19.67■□□□□ 0.74
SORT1-201ENST00000256637 LARGE2Q8N3Y3 721 aa19.67■□□□□ 0.74
SORT1-201ENST00000256637 TRIM37O94972 964 aa19.67■□□□□ 0.74
SORT1-201ENST00000256637 GINS2Q9Y248 185 aa19.67■□□□□ 0.74
SORT1-201ENST00000256637 UHRF1BP1Q6BDS2 1440 aa19.67■□□□□ 0.74
SORT1-201ENST00000256637 CNBD1Q8NA66 436 aa19.66■□□□□ 0.74
SORT1-201ENST00000256637 UPF3BQ9BZI7 483 aaKnown RBP19.66■□□□□ 0.74
SORT1-201ENST00000256637 CEP131Q9UPN4 1083 aa19.66■□□□□ 0.74
SORT1-201ENST00000256637 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
SORT1-201ENST00000256637 PPP1R12BO60237 982 aaPredicted RBP19.66■□□□□ 0.74
SORT1-201ENST00000256637 KCNA6P17658 529 aa19.66■□□□□ 0.74
SORT1-201ENST00000256637 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
SORT1-201ENST00000256637 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
SORT1-201ENST00000256637 MAGEB6Q8N7X4 407 aa19.66■□□□□ 0.74
SORT1-201ENST00000256637 HCLS1P14317 486 aaPredicted RBP19.66■□□□□ 0.74
SORT1-201ENST00000256637 TSG101Q99816 390 aa19.66■□□□□ 0.74
SORT1-201ENST00000256637 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
SORT1-201ENST00000256637 MRPS9P82933 396 aaKnown RBP19.65■□□□□ 0.74
SORT1-201ENST00000256637 CCDC39Q9UFE4 941 aa19.65■□□□□ 0.74
SORT1-201ENST00000256637 DACH1Q9UI36 760 aa19.65■□□□□ 0.74
SORT1-201ENST00000256637 CNGA1P29973 690 aa19.65■□□□□ 0.74
SORT1-201ENST00000256637 RGS22Q8NE09 1264 aa19.65■□□□□ 0.74
SORT1-201ENST00000256637 IFIT1BQ5T764 474 aaKnown RBP19.65■□□□□ 0.74
SORT1-201ENST00000256637 IRS4O14654 1257 aaPredicted RBP19.64■□□□□ 0.74
SORT1-201ENST00000256637 SSH1Q8WYL5 1049 aa19.64■□□□□ 0.73
SORT1-201ENST00000256637 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.73
SORT1-201ENST00000256637 UHRF1BP1LA0JNW5 1464 aa19.64■□□□□ 0.73
SORT1-201ENST00000256637 CHST3Q7LGC8 479 aa19.63■□□□□ 0.73
SORT1-201ENST00000256637 PA2G4Q9UQ80 394 aaKnown RBP19.63■□□□□ 0.73
SORT1-201ENST00000256637 MAGEB6P1A0A0J9YX57 407 aa19.63■□□□□ 0.73
SORT1-201ENST00000256637 RAB11FIP3O75154 756 aa19.63■□□□□ 0.73
SORT1-201ENST00000256637 C8orf76Q96K31 380 aa19.63■□□□□ 0.73
SORT1-201ENST00000256637 IDEP14735 1019 aa19.63■□□□□ 0.73
SORT1-201ENST00000256637 HOMER2Q9NSB8 354 aa19.63■□□□□ 0.73
SORT1-201ENST00000256637 PRC1O43663 620 aa19.62■□□□□ 0.73
SORT1-201ENST00000256637 CDR1P51861 262 aa19.62■□□□□ 0.73
SORT1-201ENST00000256637 MBIPQ9NS73 344 aa19.62■□□□□ 0.73
SORT1-201ENST00000256637 GOPCQ9HD26 462 aa19.62■□□□□ 0.73
SORT1-201ENST00000256637 TTF1Q15361 905 aaPredicted RBP19.62■□□□□ 0.73
SORT1-201ENST00000256637 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 GBP2P32456 591 aaPredicted RBP19.61■□□□□ 0.73
SORT1-201ENST00000256637 FANCIQ9NVI1 1328 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 KRT85P78386 507 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 GSE1Q14687 1217 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 RABEP1Q15276 862 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 AXDND1Q5T1B0 1012 aaPredicted RBP19.61■□□□□ 0.73
SORT1-201ENST00000256637 CACNA2D4Q7Z3S7 1137 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 SMARCC2Q8TAQ2 1214 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 TMOD4Q9NZQ9 345 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 ZKSCAN3Q9BRR0 538 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 ERLIN2O94905 339 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 KCNQ4P56696 695 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 CPLX3Q8WVH0 158 aa19.61■□□□□ 0.73
SORT1-201ENST00000256637 NASPP49321 788 aaPredicted RBP19.61■□□□□ 0.73
SORT1-201ENST00000256637 GLRX3O76003 335 aaKnown RBP19.6■□□□□ 0.73
SORT1-201ENST00000256637 SYCP2Q9BX26 1530 aa19.6■□□□□ 0.73
SORT1-201ENST00000256637 MCM9Q9NXL9 1143 aa19.6■□□□□ 0.73
SORT1-201ENST00000256637 HARSP12081 509 aaKnown RBP19.6■□□□□ 0.73
SORT1-201ENST00000256637 PLCD4Q9BRC7 762 aa19.6■□□□□ 0.73
SORT1-201ENST00000256637 RNF41Q9H4P4 317 aaPredicted RBP19.6■□□□□ 0.73
SORT1-201ENST00000256637 CCDC178Q5BJE1 867 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 TTC21BQ7Z4L5 1316 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 PRKCSHP14314 528 aaPredicted RBP19.59■□□□□ 0.73
SORT1-201ENST00000256637 KRT32Q14532 448 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 SYNCQ9H7C4 482 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 NPATQ14207 1427 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 RXRBP28702 533 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 LMBR1LQ6UX01 489 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 RAPGEF6Q8TEU7 1601 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 MAP7D2Q96T17 732 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 SETD1BQ9UPS6 1966 aaKnown RBP19.59■□□□□ 0.73
SORT1-201ENST00000256637 PHACTR2O75167 634 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 TNNI2P48788 182 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 CWF19L2Q2TBE0 894 aaKnown RBP19.59■□□□□ 0.73
SORT1-201ENST00000256637 GPCPD1Q9NPB8 672 aa19.59■□□□□ 0.73
SORT1-201ENST00000256637 CTNNA2P26232 953 aa19.58■□□□□ 0.73
SORT1-201ENST00000256637 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.73
SORT1-201ENST00000256637 LRSAM1Q6UWE0 723 aa19.58■□□□□ 0.73
SORT1-201ENST00000256637 ATXN8OSP0DMR3 200 aa19.58■□□□□ 0.72
SORT1-201ENST00000256637 TCHPQ9BT92 498 aa19.58■□□□□ 0.72
SORT1-201ENST00000256637 CCDC113Q9H0I3 377 aa19.58■□□□□ 0.72
SORT1-201ENST00000256637 TCIRG1Q13488 830 aa19.58■□□□□ 0.72
SORT1-201ENST00000256637 DDX39AO00148 427 aaKnown RBP19.57■□□□□ 0.72
SORT1-201ENST00000256637 CALML4Q96GE6 196 aa19.57■□□□□ 0.72
SORT1-201ENST00000256637 GCP02774 474 aa19.57■□□□□ 0.72
SORT1-201ENST00000256637 DPP8Q6V1X1 898 aaPredicted RBP19.57■□□□□ 0.72
SORT1-201ENST00000256637 LDHBP07195 334 aaKnown RBP19.57■□□□□ 0.72
SORT1-201ENST00000256637 RXRAP19793 462 aa19.57■□□□□ 0.72
SORT1-201ENST00000256637 KIF5BP33176 963 aa19.57■□□□□ 0.72
SORT1-201ENST00000256637 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.723e-6■□□□□ 10.8
SORT1-201ENST00000256637 K7ELQ4 463 aaPredicted RBP19.57■□□□□ 0.72
SORT1-201ENST00000256637 BIN1O00499 593 aa19.57■□□□□ 0.72
SORT1-201ENST00000256637 FAM170AA1A519 330 aa19.56■□□□□ 0.72
SORT1-201ENST00000256637 TAF5LO75529 589 aa19.56■□□□□ 0.72
SORT1-201ENST00000256637 GPHNQ9NQX3 736 aaPredicted RBP19.56■□□□□ 0.72
SORT1-201ENST00000256637 GJC1P36383 396 aa19.56■□□□□ 0.72
SORT1-201ENST00000256637 FAM89AQ96GI7 184 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms