RNA–Protein interactions for RNA: ENST00000254605.10

RRP8-201, Transcript of ribosomal RNA processing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP8, Length 6,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-201ENST00000254605 NOD1Q9Y239 953 aa10□□□□□ -0.81
RRP8-201ENST00000254605 BIRC2Q13490 618 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 TMCO3Q6UWJ1 677 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 CALML4Q96GE6 196 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
RRP8-201ENST00000254605 AFMP43652 599 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 MRE11P49959 708 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 SLC39A6Q13433 755 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 SPECC1Q5M775 1068 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 TSNARE1Q96NA8 513 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 PLIN2Q99541 437 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 FERP16591 822 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 HSPA2P54652 639 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 NSD3Q9BZ95 1437 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 ERLIN1O75477 346 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 KIF4BQ2VIQ3 1234 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 TMCO4Q5TGY1 634 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 HDAC9Q9UKV0 1011 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 POLR3GO15318 223 aaPredicted RBP9.99□□□□□ -0.81
RRP8-201ENST00000254605 IQCEQ6IPM2 695 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 UBE3BQ7Z3V4 1068 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 MPHOSPH6Q99547 160 aaKnown RBP9.99□□□□□ -0.81
RRP8-201ENST00000254605 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
RRP8-201ENST00000254605 SAP30BPQ9UHR5 308 aaKnown RBP9.99□□□□□ -0.81
RRP8-201ENST00000254605 URI1O94763 535 aaPredicted RBP9.98□□□□□ -0.81
RRP8-201ENST00000254605 UQCRHLA0A096LP55 91 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 PSMC4P43686 418 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 MCM2P49736 904 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 VPS36Q86VN1 386 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 CCDC63Q8NA47 563 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
RRP8-201ENST00000254605 SMTNL1A8MU46 457 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 EEF2P13639 858 aaKnown RBP9.98□□□□□ -0.81
RRP8-201ENST00000254605 PPP2R5CQ13362 524 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 NDC80O14777 642 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 RAB34Q9BZG1 259 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 BAG3O95817 575 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 PPARDQ03181 441 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 NFE2L2Q16236 605 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 AKNAQ7Z591 1439 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 EIF6P56537 245 aaKnown RBP9.98□□□□□ -0.81
RRP8-201ENST00000254605 CRACR2AQ9BSW2 395 aa9.98□□□□□ -0.81
RRP8-201ENST00000254605 TBCAO75347 108 aaKnown RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 EIF3JO75822 258 aaKnown RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 KCNA4P22459 653 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 NOP9Q86U38 636 aaKnown RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 FAM83GA6ND36 823 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 MX1P20591 662 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 CYP7A1P22680 504 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 CDC5LQ99459 802 aaKnown RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 TMPOP42166 694 aaKnown RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 MVPQ14764 893 aaKnown RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 BRD4O60885 1362 aaPredicted RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 RAB3GAP1Q15042 981 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 MAATS1Q7Z4T9 603 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 GIMAP7Q8NHV1 300 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 RAB3IL1Q8TBN0 382 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 NIP7Q9Y221 180 aaKnown RBP eCLIP9.97□□□□□ -0.81
RRP8-201ENST00000254605 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
RRP8-201ENST00000254605 PDE4BQ07343 736 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 MFSD6Q6ZSS7 791 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 PPP1R42Q7Z4L9 355 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 MIGA1Q8NAN2 632 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 JDP2Q8WYK2 163 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 CLSTN2Q9H4D0 955 aa9.97□□□□□ -0.81
RRP8-201ENST00000254605 IRX5P78411 483 aaPredicted RBP9.96□□□□□ -0.81
RRP8-201ENST00000254605 RASA3Q14644 834 aa9.96□□□□□ -0.81
RRP8-201ENST00000254605 MAP3K11Q16584 847 aa9.96□□□□□ -0.81
RRP8-201ENST00000254605 ABCA10Q8WWZ4 1543 aa9.96□□□□□ -0.81
RRP8-201ENST00000254605 SMIM23A6NLE4 172 aa9.96□□□□□ -0.81
RRP8-201ENST00000254605 RAB11FIP3O75154 756 aa9.96□□□□□ -0.81
RRP8-201ENST00000254605 NSFL1CQ9UNZ2 370 aaKnown RBP9.96□□□□□ -0.81
RRP8-201ENST00000254605 STX6O43752 255 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 KRT32Q14532 448 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 MAEAQ7L5Y9 396 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 SMARCC2Q8TAQ2 1214 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 TCP11L1Q9NUJ3 509 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 TOM1O60784 492 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 CHST3Q7LGC8 479 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 CCDC50Q8IVM0 306 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 DMRT2Q9Y5R5 561 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 SLC4A4Q9Y6R1 1079 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 HECW1Q76N89 1606 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 PTGS1P23219 599 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 PPP2R5DQ14738 602 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 USP16Q9Y5T5 823 aa9.96□□□□□ -0.82
RRP8-201ENST00000254605 CETN1Q12798 172 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 GSTA5Q7RTV2 222 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 TCEANC2Q96MN5 208 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 ANO3Q9BYT9 981 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 ANKRD24Q8TF21 1146 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 HAUS7Q99871 368 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 CWC25Q9NXE8 425 aaPredicted RBP9.95□□□□□ -0.82
RRP8-201ENST00000254605 KIF5CO60282 957 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 MXRA7P84157 204 aa9.95□□□□□ -0.82
RRP8-201ENST00000254605 GPIHBP1Q8IV16 184 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms