RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TDRD12Q587J7 1177 aaKnown RBP15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 CNNM3Q8NE01 707 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 TTC14Q96N46 770 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 ZEB2O60315 1214 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 FGFR1OPO95684 399 aaKnown RBP15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 LRCH2Q5VUJ6 765 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 AP1ARQ63HQ0 302 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 NME9Q86XW9 330 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 TATP17735 454 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 NACAP1Q9BZK3 213 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 AMOTL2Q9Y2J4 779 aa15.11■□□□□ 0.01
PCDHGA3-201ENST00000253812 KIF4AO95239 1232 aa15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 FYB1O15117 783 aa15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 ARID4AP29374 1257 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 ZC3H6P61129 1189 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 C20orf194Q5TEA3 1177 aa15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 MTMR7Q9Y216 660 aa15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 KDM5BQ9UGL1 1544 aa15.1■□□□□ 0.01
PCDHGA3-201ENST00000253812 PPP1R12BO60237 982 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 STMN4Q9H169 189 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 UBASH3AP57075 661 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 TMEM57Q8N5G2 664 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 MKRN1Q9UHC7 482 aaKnown RBP15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 CTAGE9A4FU28 777 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 CCDC158Q5M9N0 1113 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 KIAA0556O60303 1618 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 BIN1O00499 593 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 RAB11FIP3O75154 756 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 C8orf76Q96K31 380 aa15.09■□□□□ 0.01
PCDHGA3-201ENST00000253812 TRAPPC8Q9Y2L5 1435 aa15.08■□□□□ 0.01
PCDHGA3-201ENST00000253812 SYCP2Q9BX26 1530 aa15.08■□□□□ 0.01
PCDHGA3-201ENST00000253812 LARP1Q6PKG0 1096 aaKnown RBP15.08■□□□□ 0.01
PCDHGA3-201ENST00000253812 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0
PCDHGA3-201ENST00000253812 SSBP05455 408 aaKnown RBP eCLIP15.08■□□□□ 0
PCDHGA3-201ENST00000253812 ARHGAP25P42331 645 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 DDX12PQ92771 950 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 FAM135AQ9P2D6 1515 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 NEBLO76041 1014 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 ANO6Q4KMQ2 910 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 CCDC129Q6ZRS4 1044 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 TOM1L2Q6ZVM7 507 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 SNX21Q969T3 373 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 PRDM11Q9NQV5 511 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 DISP3Q9P2K9 1392 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 NDUFAB1O14561 156 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 POTEJP0CG39 1038 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 CTTNBP2Q8WZ74 1663 aa15.08■□□□□ 0
PCDHGA3-201ENST00000253812 SCAF11Q99590 1463 aaKnown RBP15.07■□□□□ 0
PCDHGA3-201ENST00000253812 KIF21AQ7Z4S6 1674 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 DESP17661 470 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 PCK1P35558 622 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 SOGA3Q5TF21 947 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 PAF1Q8N7H5 531 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 SMC6Q96SB8 1091 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 MAPKBP1O60336 1514 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
PCDHGA3-201ENST00000253812 PRPF40BQ6NWY9 871 aaKnown RBP15.07■□□□□ 0
PCDHGA3-201ENST00000253812 SIL1Q9H173 461 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 PHAXQ9H814 394 aaKnown RBP15.07■□□□□ 0
PCDHGA3-201ENST00000253812 FAM177BA6PVY3 158 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 NFE2L2Q16236 605 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 AFAP1L1Q8TED9 768 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 PIBF1Q8WXW3 757 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 HOMER2Q9NSB8 354 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 SAMD15Q9P1V8 674 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 EMILIN1Q9Y6C2 1016 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 GOLIM4O00461 696 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 GCKP35557 465 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 DDX54Q8TDD1 881 aaKnown RBP15.07■□□□□ 0
PCDHGA3-201ENST00000253812 IFT74Q96LB3 600 aa15.07■□□□□ 0
PCDHGA3-201ENST00000253812 NUTM2BA6NNL0 878 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 NUTM2EB1AL46 878 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 RIOK3O14730 519 aaKnown RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 PTGS1P23219 599 aa15.06■□□□□ 0
PCDHGA3-201ENST00000253812 CYLC1P35663 651 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 NUTM2AQ8IVF1 878 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 MAP3K9P80192 1104 aa15.06■□□□□ 0
PCDHGA3-201ENST00000253812 KIAA0753Q2KHM9 967 aa15.06■□□□□ 0
PCDHGA3-201ENST00000253812 UTP14CQ5TAP6 766 aaKnown RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 TSG101Q99816 390 aa15.06■□□□□ 0
PCDHGA3-201ENST00000253812 NOL3O60936 208 aaKnown RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 SYT10Q6XYQ8 523 aa15.06■□□□□ 0
PCDHGA3-201ENST00000253812 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
PCDHGA3-201ENST00000253812 IL1RAPL2Q9NP60 686 aa15.06■□□□□ 0
PCDHGA3-201ENST00000253812 SYT1P21579 422 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 VAV2P52735 878 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 EVCP57679 992 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 IFI16Q16666 785 aaKnown RBP15.05■□□□□ 0
PCDHGA3-201ENST00000253812 ZSCAN26Q16670 478 aa15.05■□□□□ 0
PCDHGA3-201ENST00000253812 ZNF622Q969S3 477 aaKnown RBP eCLIP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms