RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CNKSR1Q969H4 720 aa32.27■■■□□ 2.76
LSM7-201ENST00000252622 VAMP4O75379 141 aa32.26■■■□□ 2.75
LSM7-201ENST00000252622 ISCA1Q9BUE6 129 aa32.26■■■□□ 2.75
LSM7-201ENST00000252622 NPR1P16066 1061 aa32.25■■■□□ 2.75
LSM7-201ENST00000252622 RIC3Q7Z5B4 369 aa32.25■■■□□ 2.75
LSM7-201ENST00000252622 DDX58O95786 925 aaKnown RBP32.24■■■□□ 2.75
LSM7-201ENST00000252622 CRY2Q49AN0 593 aa32.24■■■□□ 2.75
LSM7-201ENST00000252622 ADCY9O60503 1353 aa32.22■■■□□ 2.75
LSM7-201ENST00000252622 E9PSI1 815 aa32.22■■■□□ 2.75
LSM7-201ENST00000252622 TRIM28Q13263 835 aaKnown RBP32.22■■■□□ 2.75
LSM7-201ENST00000252622 TCERG1O14776 1098 aaKnown RBP32.21■■■□□ 2.75
LSM7-201ENST00000252622 SLC10A5Q5PT55 438 aa32.21■■■□□ 2.75
LSM7-201ENST00000252622 SLC4A2P04920 1241 aa32.2■■■□□ 2.75
LSM7-201ENST00000252622 PRPF40BQ6NWY9 871 aaKnown RBP32.2■■■□□ 2.75
LSM7-201ENST00000252622 TRMT112Q9UI30 125 aaKnown RBP32.2■■■□□ 2.75
LSM7-201ENST00000252622 ZNF784Q8NCA9 323 aaPredicted RBP32.19■■■□□ 2.74
LSM7-201ENST00000252622 SH3TC1Q8TE82 1336 aa32.19■■■□□ 2.74
LSM7-201ENST00000252622 ATP5J2-PTCD1G3V325 749 aa32.18■■■□□ 2.74
LSM7-201ENST00000252622 SLX4Q8IY92 1834 aa32.18■■■□□ 2.74
LSM7-201ENST00000252622 KSR2Q6VAB6 950 aa32.17■■■□□ 2.74
LSM7-201ENST00000252622 CACNA1FO60840 1977 aa32.16■■■□□ 2.74
LSM7-201ENST00000252622 ALDH1B1P30837 517 aa32.16■■■□□ 2.74
LSM7-201ENST00000252622 HOXA10P31260 410 aaPredicted RBP32.16■■■□□ 2.74
LSM7-201ENST00000252622 SLFN5Q08AF3 891 aa32.16■■■□□ 2.74
LSM7-201ENST00000252622 G2E3Q7L622 706 aa32.16■■■□□ 2.74
LSM7-201ENST00000252622 NLRP3Q96P20 1036 aa32.16■■■□□ 2.74
LSM7-201ENST00000252622 MYD88Q99836 296 aa32.16■■■□□ 2.74
LSM7-201ENST00000252622 METTL22Q9BUU2 404 aaPredicted RBP32.16■■■□□ 2.74
LSM7-201ENST00000252622 CACNA1SQ13698 1873 aa32.15■■■□□ 2.74
LSM7-201ENST00000252622 C21orf2O43822 256 aa32.15■■■□□ 2.74
LSM7-201ENST00000252622 SOGA3Q5TF21 947 aa32.15■■■□□ 2.74
LSM7-201ENST00000252622 RPGRQ92834 1020 aaKnown RBP32.15■■■□□ 2.74
LSM7-201ENST00000252622 MAP3K2Q9Y2U5 619 aa32.15■■■□□ 2.74
LSM7-201ENST00000252622 PI4KAP2A4QPH2 592 aa32.14■■■□□ 2.74
LSM7-201ENST00000252622 FLIIQ13045 1269 aa32.14■■■□□ 2.74
LSM7-201ENST00000252622 C3orf67Q6ZVT6 689 aa32.14■■■□□ 2.74
LSM7-201ENST00000252622 PI4KAP1Q8N8J0 262 aa32.14■■■□□ 2.74
LSM7-201ENST00000252622 SYNE4Q8N205 404 aa32.12■■■□□ 2.73
LSM7-201ENST00000252622 CCDC191Q8NCU4 936 aa32.12■■■□□ 2.73
LSM7-201ENST00000252622 C7orf43Q8WVR3 580 aa32.12■■■□□ 2.73
LSM7-201ENST00000252622 ZNF219Q9P2Y4 722 aaPredicted RBP32.12■■■□□ 2.73
LSM7-201ENST00000252622 NFKBIEO00221 500 aa32.11■■■□□ 2.73
LSM7-201ENST00000252622 RASSF7Q02833 373 aa32.11■■■□□ 2.73
LSM7-201ENST00000252622 C9orf131Q5VYM1 1079 aa32.11■■■□□ 2.73
LSM7-201ENST00000252622 RBM17Q96I25 401 aaKnown RBP32.11■■■□□ 2.73
LSM7-201ENST00000252622 HCLS1P14317 486 aaPredicted RBP32.1■■■□□ 2.73
LSM7-201ENST00000252622 CRAMP1Q96RY5 1269 aa32.1■■■□□ 2.73
LSM7-201ENST00000252622 TRMT2AQ8IZ69 625 aaKnown RBP32.09■■■□□ 2.73
LSM7-201ENST00000252622 FAM89AQ96GI7 184 aa32.09■■■□□ 2.73
LSM7-201ENST00000252622 CDCA7LQ96GN5 454 aa32.09■■■□□ 2.73
LSM7-201ENST00000252622 CWC25Q9NXE8 425 aaPredicted RBP32.09■■■□□ 2.73
LSM7-201ENST00000252622 FER1L6Q2WGJ9 1857 aa32.09■■■□□ 2.73
LSM7-201ENST00000252622 LAMB2P55268 1798 aa32.09■■■□□ 2.73
LSM7-201ENST00000252622 DDX60Q8IY21 1712 aaKnown RBP32.09■■■□□ 2.73
LSM7-201ENST00000252622 LTBP3Q9NS15 1303 aa32.08■■■□□ 2.73
LSM7-201ENST00000252622 FKBP5Q13451 457 aaPredicted RBP32.08■■■□□ 2.73
LSM7-201ENST00000252622 ZBTB38Q8NAP3 1195 aaPredicted RBP32.08■■■□□ 2.73
LSM7-201ENST00000252622 ZNF428Q96B54 188 aa32.08■■■□□ 2.73
LSM7-201ENST00000252622 SBF1O95248 1867 aa32.08■■■□□ 2.73
LSM7-201ENST00000252622 LMNB1P20700 586 aa32.07■■■□□ 2.72
LSM7-201ENST00000252622 NEXNQ0ZGT2 675 aa32.07■■■□□ 2.72
LSM7-201ENST00000252622 CCDC93Q567U6 631 aa32.07■■■□□ 2.72
LSM7-201ENST00000252622 RNF181Q9P0P0 153 aa32.07■■■□□ 2.72
LSM7-201ENST00000252622 PCCAP05165 728 aaPredicted RBP32.05■■■□□ 2.72
LSM7-201ENST00000252622 IGKV5-2P06315 115 aa32.05■■■□□ 2.72
LSM7-201ENST00000252622 TAOK3Q9H2K8 898 aa32.05■■■□□ 2.72
LSM7-201ENST00000252622 PRELPP51888 382 aa32.04■■■□□ 2.72
LSM7-201ENST00000252622 DNAAF4Q8WXU2 420 aa32.04■■■□□ 2.72
LSM7-201ENST00000252622 IRS4O14654 1257 aaPredicted RBP32.03■■■□□ 2.72
LSM7-201ENST00000252622 HSP90B1P14625 803 aaKnown RBP32.03■■■□□ 2.72
LSM7-201ENST00000252622 ABCC4O15439 1325 aa32.02■■■□□ 2.72
LSM7-201ENST00000252622 ZC3H4Q9UPT8 1303 aaKnown RBP32.02■■■□□ 2.72
LSM7-201ENST00000252622 SF3B3Q15393 1217 aaKnown RBP32.02■■■□□ 2.72
LSM7-201ENST00000252622 RTL5Q5HYW3 569 aaPredicted RBP32.02■■■□□ 2.72
LSM7-201ENST00000252622 CC2D2BQ6DHV5 1058 aa32.02■■■□□ 2.72
LSM7-201ENST00000252622 SNED1Q8TER0 1413 aa32.01■■■□□ 2.72
LSM7-201ENST00000252622 NEURL1BA8MQ27 555 aa32.01■■■□□ 2.71
LSM7-201ENST00000252622 PPEF1O14829 653 aaPredicted RBP32.01■■■□□ 2.71
LSM7-201ENST00000252622 RTKN2Q8IZC4 609 aa32.01■■■□□ 2.71
LSM7-201ENST00000252622 CWF19L2Q2TBE0 894 aaKnown RBP31.99■■■□□ 2.71
LSM7-201ENST00000252622 OLFM4Q6UX06 510 aa31.99■■■□□ 2.71
LSM7-201ENST00000252622 DDX46Q7L014 1031 aaKnown RBP31.99■■■□□ 2.71
LSM7-201ENST00000252622 CDHR2Q9BYE9 1310 aa31.99■■■□□ 2.71
LSM7-201ENST00000252622 CT47B1P0C2W7 299 aaPredicted RBP31.98■■■□□ 2.71
LSM7-201ENST00000252622 FKBP4Q02790 459 aaKnown RBP eCLIP31.98■■■□□ 2.71
LSM7-201ENST00000252622 GRIPAP1Q4V328 841 aa31.98■■■□□ 2.71
LSM7-201ENST00000252622 LINS1Q8NG48 757 aa31.98■■■□□ 2.71
LSM7-201ENST00000252622 GPBP1L1Q9HC44 474 aaPredicted RBP31.97■■■□□ 2.71
LSM7-201ENST00000252622 BBOX1O75936 387 aa31.96■■■□□ 2.71
LSM7-201ENST00000252622 HNRNPUQ00839 825 aaKnown RBP eCLIP31.96■■■□□ 2.71
LSM7-201ENST00000252622 GRAPQ13588 217 aa31.96■■■□□ 2.71
LSM7-201ENST00000252622 TIAM2Q8IVF5 1701 aa31.96■■■□□ 2.71
LSM7-201ENST00000252622 MRPL50Q8N5N7 158 aaKnown RBP31.96■■■□□ 2.71
LSM7-201ENST00000252622 GRAPLQ8TC17 118 aaPredicted RBP31.96■■■□□ 2.71
LSM7-201ENST00000252622 ATP6V0A2Q9Y487 856 aa31.95■■■□□ 2.71
LSM7-201ENST00000252622 F6X3S4 739 aa31.94■■■□□ 2.7
LSM7-201ENST00000252622 PDE8AO60658 829 aa31.94■■■□□ 2.7
LSM7-201ENST00000252622 GCKRQ14397 625 aa31.94■■■□□ 2.7
LSM7-201ENST00000252622 ALDH1L2Q3SY69 923 aa31.94■■■□□ 2.7
LSM7-201ENST00000252622 ZNF526Q8TF50 670 aaPredicted RBP31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 530.6 ms