RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 IL6STP40189 918 aaPredicted RBP28.76■■■□□ 2.19
SYNGR3-201ENST00000248121 RTL5Q5HYW3 569 aaPredicted RBP28.76■■■□□ 2.19
SYNGR3-201ENST00000248121 A0A087WZG4 1122 aa28.76■■■□□ 2.19
SYNGR3-201ENST00000248121 CASP7P55210 303 aa28.76■■■□□ 2.19
SYNGR3-201ENST00000248121 KRT27Q7Z3Y8 459 aa28.76■■■□□ 2.19
SYNGR3-201ENST00000248121 IL1RAPL2Q9NP60 686 aa28.76■■■□□ 2.19
SYNGR3-201ENST00000248121 EIF5P55010 431 aaKnown RBP28.75■■■□□ 2.19
SYNGR3-201ENST00000248121 MX1P20591 662 aa28.74■■■□□ 2.19
SYNGR3-201ENST00000248121 RBM6P78332 1123 aaKnown RBP28.74■■■□□ 2.19
SYNGR3-201ENST00000248121 SMIM5Q71RC9 77 aa28.74■■■□□ 2.19
SYNGR3-201ENST00000248121 RHPN1Q8TCX5 695 aa28.74■■■□□ 2.19
SYNGR3-201ENST00000248121 ISCA1Q9BUE6 129 aa28.74■■■□□ 2.19
SYNGR3-201ENST00000248121 TCIRG1Q13488 830 aa28.73■■■□□ 2.19
SYNGR3-201ENST00000248121 DZIP3Q86Y13 1208 aaKnown RBP28.73■■■□□ 2.19
SYNGR3-201ENST00000248121 RGS17Q9UGC6 210 aaPredicted RBP28.73■■■□□ 2.19
SYNGR3-201ENST00000248121 STAP2Q9UGK3 403 aa28.73■■■□□ 2.19
SYNGR3-201ENST00000248121 FBXO41Q8TF61 875 aa28.72■■■□□ 2.19
SYNGR3-201ENST00000248121 TBC1D2Q9BYX2 928 aa28.72■■■□□ 2.19
SYNGR3-201ENST00000248121 CWC25Q9NXE8 425 aaPredicted RBP28.72■■■□□ 2.19
SYNGR3-201ENST00000248121 HDAC5Q9UQL6 1122 aa28.72■■■□□ 2.19
SYNGR3-201ENST00000248121 BECN1Q14457 450 aa28.71■■■□□ 2.19
SYNGR3-201ENST00000248121 GIGYF2Q6Y7W6 1299 aaKnown RBP28.71■■■□□ 2.19
SYNGR3-201ENST00000248121 KIF1BPQ96EK5 621 aa28.71■■■□□ 2.19
SYNGR3-201ENST00000248121 BCORQ6W2J9 1755 aa28.71■■■□□ 2.19
SYNGR3-201ENST00000248121 GPTP24298 496 aa28.7■■■□□ 2.19
SYNGR3-201ENST00000248121 PA2G4Q9UQ80 394 aaKnown RBP28.7■■■□□ 2.19
SYNGR3-201ENST00000248121 H7C1W4 665 aa28.7■■■□□ 2.18
SYNGR3-201ENST00000248121 CCDC191Q8NCU4 936 aa28.69■■■□□ 2.18
SYNGR3-201ENST00000248121 KIF2CQ99661 725 aa28.69■■■□□ 2.18
SYNGR3-201ENST00000248121 CCNL1Q9UK58 526 aaPredicted RBP28.69■■■□□ 2.18
SYNGR3-201ENST00000248121 NUTM1Q86Y26 1132 aa28.68■■■□□ 2.18
SYNGR3-201ENST00000248121 BCL11BQ9C0K0 894 aaPredicted RBP28.68■■■□□ 2.18
SYNGR3-201ENST00000248121 COL15A1P39059 1388 aa28.68■■■□□ 2.18
SYNGR3-201ENST00000248121 HSP90AB4PQ58FF6 505 aa28.67■■■□□ 2.18
SYNGR3-201ENST00000248121 TRIM37O94972 964 aa28.66■■■□□ 2.18
SYNGR3-201ENST00000248121 AMIGO3Q86WK7 504 aa28.66■■■□□ 2.18
SYNGR3-201ENST00000248121 KLHDC4Q8TBB5 520 aa28.66■■■□□ 2.18
SYNGR3-201ENST00000248121 NBR1Q14596 966 aa28.66■■■□□ 2.18
SYNGR3-201ENST00000248121 FAM196AQ6ZSG2 479 aa28.66■■■□□ 2.18
SYNGR3-201ENST00000248121 C4BP0C0L5 1744 aa28.65■■■□□ 2.18
SYNGR3-201ENST00000248121 AOX1Q06278 1338 aa28.65■■■□□ 2.18
SYNGR3-201ENST00000248121 UBN2Q6ZU65 1347 aa28.65■■■□□ 2.18
SYNGR3-201ENST00000248121 SYNE4Q8N205 404 aa28.65■■■□□ 2.18
SYNGR3-201ENST00000248121 CNTNAP4Q9C0A0 1308 aa28.65■■■□□ 2.18
SYNGR3-201ENST00000248121 CAMTA2O94983 1202 aa28.65■■■□□ 2.18
SYNGR3-201ENST00000248121 FOXO4P98177 505 aa28.64■■■□□ 2.18
SYNGR3-201ENST00000248121 POTEAQ6S8J7 498 aa28.64■■■□□ 2.18
SYNGR3-201ENST00000248121 ERVV-1B6SEH8 477 aa28.63■■■□□ 2.17
SYNGR3-201ENST00000248121 NLRP10Q86W26 655 aa28.63■■■□□ 2.17
SYNGR3-201ENST00000248121 LRRC4BQ9NT99 713 aa28.63■■■□□ 2.17
SYNGR3-201ENST00000248121 TRIM28Q13263 835 aaKnown RBP28.63■■■□□ 2.17
SYNGR3-201ENST00000248121 RABL6Q3YEC7 729 aaPredicted RBP28.63■■■□□ 2.17
SYNGR3-201ENST00000248121 FAM89AQ96GI7 184 aa28.63■■■□□ 2.17
SYNGR3-201ENST00000248121 RXRBP28702 533 aa28.62■■■□□ 2.17
SYNGR3-201ENST00000248121 SCN7AQ01118 1682 aa28.62■■■□□ 2.17
SYNGR3-201ENST00000248121 PI4K2BQ8TCG2 481 aa28.62■■■□□ 2.17
SYNGR3-201ENST00000248121 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.62■■■□□ 2.17
SYNGR3-201ENST00000248121 OS9Q13438 667 aaPredicted RBP28.61■■■□□ 2.17
SYNGR3-201ENST00000248121 USP26Q9BXU7 913 aa28.61■■■□□ 2.17
SYNGR3-201ENST00000248121 C4AP0C0L4 1744 aa28.6■■■□□ 2.17
SYNGR3-201ENST00000248121 RFX5P48382 616 aaPredicted RBP28.6■■■□□ 2.17
SYNGR3-201ENST00000248121 CASC1Q6TDU7 716 aa28.6■■■□□ 2.17
SYNGR3-201ENST00000248121 LMBR1LQ6UX01 489 aa28.6■■■□□ 2.17
SYNGR3-201ENST00000248121 ZNF34Q8IZ26 560 aa28.59■■■□□ 2.17
SYNGR3-201ENST00000248121 SIL1Q9H173 461 aa28.59■■■□□ 2.17
SYNGR3-201ENST00000248121 EIF5BO60841 1220 aaKnown RBP28.58■■■□□ 2.17
SYNGR3-201ENST00000248121 MYH3P11055 1940 aa28.58■■■□□ 2.17
SYNGR3-201ENST00000248121 GNPATO15228 680 aa28.58■■■□□ 2.17
SYNGR3-201ENST00000248121 SASH1O94885 1247 aa28.58■■■□□ 2.17
SYNGR3-201ENST00000248121 HSP90AB3PQ58FF7 597 aa28.58■■■□□ 2.17
SYNGR3-201ENST00000248121 USP42Q9H9J4 1324 aaKnown RBP28.58■■■□□ 2.17
SYNGR3-201ENST00000248121 PCCAP05165 728 aaPredicted RBP28.57■■■□□ 2.16
SYNGR3-201ENST00000248121 ERC1Q8IUD2 1116 aa28.57■■■□□ 2.16
SYNGR3-201ENST00000248121 ZBTB38Q8NAP3 1195 aaPredicted RBP28.57■■■□□ 2.16
SYNGR3-201ENST00000248121 TRIM6-TRIM34B2RNG4 842 aa28.56■■■□□ 2.16
SYNGR3-201ENST00000248121 RILPL2Q969X0 211 aa28.56■■■□□ 2.16
SYNGR3-201ENST00000248121 RC3H1Q5TC82 1133 aaKnown RBP28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 CLASRPQ8N2M8 674 aaKnown RBP28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 CHMP3Q9Y3E7 222 aa28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 UBR3Q6ZT12 1888 aa28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 ERC2O15083 957 aa28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 PTPN12Q05209 780 aaKnown RBP28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 SNX21Q969T3 373 aa28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 ANTXR1Q9H6X2 564 aa28.55■■■□□ 2.16
SYNGR3-201ENST00000248121 FAM177BA6PVY3 158 aa28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 CHMLP26374 656 aa28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 SRP68Q9UHB9 627 aaKnown RBP28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 AK9Q5TCS8 1911 aa28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 RPS6KA4O75676 772 aa28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 SUSD4Q5VX71 490 aa28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 CCDC85AQ96PX6 553 aaPredicted RBP28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 DDX60Q8IY21 1712 aaKnown RBP28.54■■■□□ 2.16
SYNGR3-201ENST00000248121 G3BP1Q13283 466 aaKnown RBP eCLIP28.53■■■□□ 2.16
SYNGR3-201ENST00000248121 SLKQ9H2G2 1235 aaPredicted RBP28.53■■■□□ 2.16
SYNGR3-201ENST00000248121 ESYT1Q9BSJ8 1104 aa28.52■■■□□ 2.16
SYNGR3-201ENST00000248121 BCL2L12Q9HB09 334 aa28.52■■■□□ 2.16
SYNGR3-201ENST00000248121 TRMT112Q9UI30 125 aaKnown RBP28.52■■■□□ 2.16
SYNGR3-201ENST00000248121 TNS1Q9HBL0 1735 aaKnown RBP28.52■■■□□ 2.16
SYNGR3-201ENST00000248121 TTC41PQ6P2S7 1318 aa28.52■■■□□ 2.16
SYNGR3-201ENST00000248121 REC8O95072 547 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms