RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
SIN3B-201ENST00000248054 MED14O60244 1454 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 ESYT1Q9BSJ8 1104 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 AOX1Q06278 1338 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.55
SIN3B-201ENST00000248054 SLC52A2Q9HAB3 445 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 DYNC1I1O14576 645 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 MPNDQ8N594 471 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 ABCC4O15439 1325 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 QRICH2Q9H0J4 1663 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 CCDC192P0DO97 292 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 GPTP24298 496 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 CCDC152Q4G0S7 254 aa18.51■□□□□ 0.55
SIN3B-201ENST00000248054 RNF41Q9H4P4 317 aaPredicted RBP18.51■□□□□ 0.55
SIN3B-201ENST00000248054 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
SIN3B-201ENST00000248054 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
SIN3B-201ENST00000248054 OFD1O75665 1012 aa18.5■□□□□ 0.55
SIN3B-201ENST00000248054 TXLNAP40222 546 aa18.5■□□□□ 0.55
SIN3B-201ENST00000248054 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
SIN3B-201ENST00000248054 TNPO1Q92973 898 aaKnown RBP18.49■□□□□ 0.55
SIN3B-201ENST00000248054 SPATA32Q96LK8 384 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 NAPBQ9H115 298 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 KIDINS220Q9ULH0 1771 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 CCDC196A0A1B0GTZ2 297 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 CCDC66A2RUB6 948 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 SLAIN2Q9P270 581 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 NOL7Q9UMY1 257 aaKnown RBP18.49■□□□□ 0.55
SIN3B-201ENST00000248054 LMBR1LQ6UX01 489 aa18.49■□□□□ 0.55
SIN3B-201ENST00000248054 PLBD2Q8NHP8 589 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 RAD50Q92878 1312 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 ZNF213O14771 459 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 SCAND2PQ9GZW5 306 aaPredicted RBP18.48■□□□□ 0.55
SIN3B-201ENST00000248054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.48■□□□□ 0.552e-6■□□□□ 11.2
SIN3B-201ENST00000248054 NEURL4Q96JN8 1562 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
SIN3B-201ENST00000248054 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 GOLIM4O00461 696 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
SIN3B-201ENST00000248054 ABCF2Q9UG63 623 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 TCEAL9Q9UHQ7 104 aa18.48■□□□□ 0.55
SIN3B-201ENST00000248054 G2E3Q7L622 706 aa18.47■□□□□ 0.55
SIN3B-201ENST00000248054 METTL22Q9BUU2 404 aaPredicted RBP18.47■□□□□ 0.55
SIN3B-201ENST00000248054 CGNQ9P2M7 1197 aaKnown RBP18.47■□□□□ 0.55
SIN3B-201ENST00000248054 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
SIN3B-201ENST00000248054 TAF3Q5VWG9 929 aa18.47■□□□□ 0.55
SIN3B-201ENST00000248054 SLF2Q8IX21 1173 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 TNMDQ9H2S6 317 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
SIN3B-201ENST00000248054 UBAP1LF5GYI3 381 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 ME1P48163 572 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 TRIM5Q9C035 493 aa18.46■□□□□ 0.55
SIN3B-201ENST00000248054 ATP6V1AP38606 617 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 ERCC4Q92889 916 aaPredicted RBP18.45■□□□□ 0.54
SIN3B-201ENST00000248054 TMEM94Q12767 1356 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 ERVV-2B6SEH9 535 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 SEC24BO95487 1268 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 CDR1P51861 262 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 AK7Q96M32 723 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 USP19O94966 1318 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
SIN3B-201ENST00000248054 PCMTD1Q96MG8 357 aaPredicted RBP18.45■□□□□ 0.54
SIN3B-201ENST00000248054 BCL11BQ9C0K0 894 aaPredicted RBP18.44■□□□□ 0.54
SIN3B-201ENST00000248054 ATP2B3Q16720 1220 aa18.44■□□□□ 0.54
SIN3B-201ENST00000248054 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
SIN3B-201ENST00000248054 NUP133Q8WUM0 1156 aa18.44■□□□□ 0.54
SIN3B-201ENST00000248054 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
SIN3B-201ENST00000248054 DACH1Q9UI36 760 aa18.44■□□□□ 0.54
SIN3B-201ENST00000248054 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
SIN3B-201ENST00000248054 NEK1Q96PY6 1258 aa18.44■□□□□ 0.54
SIN3B-201ENST00000248054 HSP90B2PQ58FF3 399 aa18.44■□□□□ 0.54
SIN3B-201ENST00000248054 DDX46Q7L014 1031 aaKnown RBP18.43■□□□□ 0.54
SIN3B-201ENST00000248054 ERBB4Q15303 1308 aa18.43■□□□□ 0.54
SIN3B-201ENST00000248054 NOM1Q5C9Z4 860 aaKnown RBP18.43■□□□□ 0.54
SIN3B-201ENST00000248054 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
SIN3B-201ENST00000248054 SPTY2D1Q68D10 685 aaPredicted RBP18.43■□□□□ 0.54
SIN3B-201ENST00000248054 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
SIN3B-201ENST00000248054 ARHGEF25Q86VW2 580 aa18.43■□□□□ 0.54
SIN3B-201ENST00000248054 CCDC191Q8NCU4 936 aa18.43■□□□□ 0.54
SIN3B-201ENST00000248054 CEP131Q9UPN4 1083 aa18.43■□□□□ 0.54
SIN3B-201ENST00000248054 TULP4Q9NRJ4 1543 aa18.43■□□□□ 0.54
SIN3B-201ENST00000248054 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
SIN3B-201ENST00000248054 NUP62CLQ9H1M0 184 aa18.43■□□□□ 0.54
SIN3B-201ENST00000248054 NEXMIFQ5QGS0 1516 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 PPP4R3BQ5MIZ7 849 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
SIN3B-201ENST00000248054 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
SIN3B-201ENST00000248054 NYXQ9GZU5 481 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 LDHCP07864 332 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 DZIP1Q86YF9 867 aaKnown RBP18.42■□□□□ 0.54
SIN3B-201ENST00000248054 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
SIN3B-201ENST00000248054 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms