RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
CHPF-201ENST00000243776 LARP1Q6PKG0 1096 aaKnown RBP22.13■■□□□ 1.13
CHPF-201ENST00000243776 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
CHPF-201ENST00000243776 PTPRUQ92729 1446 aa22.13■■□□□ 1.13
CHPF-201ENST00000243776 TYRO3Q06418 890 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 ANO6Q4KMQ2 910 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 C16orf45Q96MC5 204 aaPredicted RBP22.12■■□□□ 1.13
CHPF-201ENST00000243776 CCDC171Q6TFL3 1326 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 TEFQ10587 303 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 MAP3K11Q16584 847 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 MRVI1Q9Y6F6 885 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 A0A0D9SFI3 127 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 BTBD11A6QL63 1104 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 NECTIN1Q15223 517 aa22.12■■□□□ 1.13
CHPF-201ENST00000243776 A0A087WWV3 80 aa22.11■■□□□ 1.13
CHPF-201ENST00000243776 KRT85P78386 507 aa22.11■■□□□ 1.13
CHPF-201ENST00000243776 TNMDQ9H2S6 317 aa22.11■■□□□ 1.13
CHPF-201ENST00000243776 EAF2Q96CJ1 260 aaPredicted RBP22.11■■□□□ 1.13
CHPF-201ENST00000243776 FSD1Q9BTV5 496 aa22.1■■□□□ 1.13
CHPF-201ENST00000243776 TRIM5Q9C035 493 aa22.1■■□□□ 1.13
CHPF-201ENST00000243776 SLC27A2O14975 620 aa22.1■■□□□ 1.13
CHPF-201ENST00000243776 U2AF2P26368 475 aaKnown RBP eCLIP22.1■■□□□ 1.13
CHPF-201ENST00000243776 NAA30Q147X3 362 aaPredicted RBP22.1■■□□□ 1.13
CHPF-201ENST00000243776 HSP90AB4PQ58FF6 505 aa22.1■■□□□ 1.13
CHPF-201ENST00000243776 FBXW7Q969H0 707 aa22.09■■□□□ 1.13
CHPF-201ENST00000243776 SPATA32Q96LK8 384 aa22.09■■□□□ 1.13
CHPF-201ENST00000243776 ZSCAN31Q96LW9 406 aaPredicted RBP22.09■■□□□ 1.13
CHPF-201ENST00000243776 LRRC2Q9BYS8 371 aa22.09■■□□□ 1.13
CHPF-201ENST00000243776 CBX8Q9HC52 389 aa22.09■■□□□ 1.13
CHPF-201ENST00000243776 SH2B1Q9NRF2 756 aaPredicted RBP22.09■■□□□ 1.13
CHPF-201ENST00000243776 JAK2O60674 1132 aa22.09■■□□□ 1.13
CHPF-201ENST00000243776 CHAF1AQ13111 956 aaPredicted RBP22.09■■□□□ 1.13
CHPF-201ENST00000243776 ADCY9O60503 1353 aa22.09■■□□□ 1.13
CHPF-201ENST00000243776 FAM208AQ9UK61 1670 aaKnown RBP22.09■■□□□ 1.13
CHPF-201ENST00000243776 SMAP1Q8IYB5 467 aaPredicted RBP22.09■■□□□ 1.13
CHPF-201ENST00000243776 FAM200AQ8TCP9 573 aa22.09■■□□□ 1.13
CHPF-201ENST00000243776 ZNF589Q86UQ0 364 aaPredicted RBP22.08■■□□□ 1.13
CHPF-201ENST00000243776 PDCL2Q8N4E4 241 aa22.08■■□□□ 1.13
CHPF-201ENST00000243776 BICD2Q8TD16 824 aa22.08■■□□□ 1.13
CHPF-201ENST00000243776 TTC41PQ6P2S7 1318 aa22.08■■□□□ 1.13
CHPF-201ENST00000243776 ZNF530Q6P9A1 599 aaPredicted RBP22.08■■□□□ 1.12
CHPF-201ENST00000243776 GPATCH3Q96I76 525 aa22.08■■□□□ 1.12
CHPF-201ENST00000243776 DNAJC25Q9H1X3 360 aa22.08■■□□□ 1.12
CHPF-201ENST00000243776 NR1I2O75469 434 aa22.07■■□□□ 1.12
CHPF-201ENST00000243776 BLOC1S2Q6QNY1 142 aa22.07■■□□□ 1.12
CHPF-201ENST00000243776 EPB41L2O43491 1005 aaKnown RBP22.07■■□□□ 1.12
CHPF-201ENST00000243776 SASH1O94885 1247 aa22.07■■□□□ 1.12
CHPF-201ENST00000243776 EVI5LQ96CN4 794 aa22.07■■□□□ 1.12
CHPF-201ENST00000243776 ZNF592Q92610 1267 aa22.06■■□□□ 1.12
CHPF-201ENST00000243776 SUCLG2Q96I99 432 aa22.06■■□□□ 1.12
CHPF-201ENST00000243776 GOLGA6L6A8MZA4 724 aa22.06■■□□□ 1.12
CHPF-201ENST00000243776 BICC1Q9H694 974 aaKnown RBP22.06■■□□□ 1.12
CHPF-201ENST00000243776 ZSCAN20P17040 1043 aaPredicted RBP22.05■■□□□ 1.12
CHPF-201ENST00000243776 G3BP1Q13283 466 aaKnown RBP eCLIP22.05■■□□□ 1.12
CHPF-201ENST00000243776 EID1Q9Y6B2 187 aa22.05■■□□□ 1.12
CHPF-201ENST00000243776 GTF2F1P35269 517 aaKnown RBP eCLIP22.05■■□□□ 1.12
CHPF-201ENST00000243776 RGPD8O14715 1765 aaPredicted RBP22.04■■□□□ 1.12
CHPF-201ENST00000243776 CCDC129Q6ZRS4 1044 aa22.04■■□□□ 1.12
CHPF-201ENST00000243776 MAP4K1Q92918 833 aa22.04■■□□□ 1.12
CHPF-201ENST00000243776 PIP4K2AP48426 406 aaPredicted RBP22.04■■□□□ 1.12
CHPF-201ENST00000243776 ARID5BQ14865 1188 aa22.04■■□□□ 1.12
CHPF-201ENST00000243776 LEO1Q8WVC0 666 aaPredicted RBP22.04■■□□□ 1.12
CHPF-201ENST00000243776 ERCC4Q92889 916 aaPredicted RBP22.04■■□□□ 1.12
CHPF-201ENST00000243776 FMN2Q9NZ56 1722 aa22.03■■□□□ 1.12
CHPF-201ENST00000243776 TOB2Q14106 344 aaPredicted RBP22.03■■□□□ 1.12
CHPF-201ENST00000243776 TM6SF1Q9BZW5 370 aa22.03■■□□□ 1.12
CHPF-201ENST00000243776 FTOQ9C0B1 505 aaKnown RBP eCLIP22.03■■□□□ 1.121e-9■□□□□ 9.9
CHPF-201ENST00000243776 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
CHPF-201ENST00000243776 LMOD2Q6P5Q4 547 aa22.03■■□□□ 1.12
CHPF-201ENST00000243776 PGBD1Q96JS3 809 aa22.03■■□□□ 1.12
CHPF-201ENST00000243776 NALCNQ8IZF0 1738 aa22.02■■□□□ 1.12
CHPF-201ENST00000243776 KAZALD1Q96I82 304 aa22.02■■□□□ 1.12
CHPF-201ENST00000243776 SEC62Q99442 399 aaKnown RBP22.02■■□□□ 1.12
CHPF-201ENST00000243776 NAP1L2Q9ULW6 460 aaPredicted RBP22.02■■□□□ 1.12
CHPF-201ENST00000243776 MYL6BP14649 208 aa22.01■■□□□ 1.11
CHPF-201ENST00000243776 ZNF165P49910 485 aa22.01■■□□□ 1.11
CHPF-201ENST00000243776 DBF4Q9UBU7 674 aaPredicted RBP22.01■■□□□ 1.11
CHPF-201ENST00000243776 SLFNL1Q499Z3 407 aa22.01■■□□□ 1.11
CHPF-201ENST00000243776 CCDC144BQ3MJ40 725 aa22.01■■□□□ 1.11
CHPF-201ENST00000243776 CCDC144CPQ8IYA2 1237 aa22.01■■□□□ 1.11
CHPF-201ENST00000243776 USP42Q9H9J4 1324 aaKnown RBP22■■□□□ 1.11
CHPF-201ENST00000243776 KCNA6P17658 529 aa22■■□□□ 1.11
CHPF-201ENST00000243776 RPS6KB1P23443 525 aa22■■□□□ 1.11
CHPF-201ENST00000243776 PSMA5P28066 241 aa22■■□□□ 1.11
CHPF-201ENST00000243776 BRF1Q92994 677 aa22■■□□□ 1.11
CHPF-201ENST00000243776 PXDNLA1KZ92 1463 aa22■■□□□ 1.11
CHPF-201ENST00000243776 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.99■■□□□ 1.113e-8■■□□□ 13.5
CHPF-201ENST00000243776 TAOK2Q9UL54 1235 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 V9GYY5 206 aaPredicted RBP21.99■■□□□ 1.11
CHPF-201ENST00000243776 AGLP35573 1532 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 H3BQV1 296 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 TNNT1P13805 278 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 ZNF75DP51815 510 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 IFFO2Q5TF58 517 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 ZSCAN25Q6NSZ9 544 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 KSR2Q6VAB6 950 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 CACTINQ8WUQ7 758 aaKnown RBP21.99■■□□□ 1.11
CHPF-201ENST00000243776 DNAJC2Q99543 621 aaKnown RBP21.99■■□□□ 1.11
CHPF-201ENST00000243776 CLIP2Q9UDT6 1046 aa21.99■■□□□ 1.11
CHPF-201ENST00000243776 FGD1P98174 961 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms