RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 FCHSD2O94868 740 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 VAMP1P23763 118 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 PPP4R3BQ5MIZ7 849 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 SLAIN1Q8ND83 568 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 GDPD2Q9HCC8 539 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 MAP3K5Q99683 1374 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 GNPATO15228 680 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 KRT27Q7Z3Y8 459 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 WWC1Q8IX03 1113 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 SMAP1Q8IYB5 467 aaPredicted RBP4.61□□□□□ -1.67
UFM1-201ENST00000239878 VRTNQ9H8Y1 702 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 SUGT1Q9Y2Z0 365 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 PDAP1Q13442 181 aaKnown RBP4.61□□□□□ -1.67
UFM1-201ENST00000239878 TTLL12Q14166 644 aaPredicted RBP4.61□□□□□ -1.67
UFM1-201ENST00000239878 TOM1L2Q6ZVM7 507 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 USHBP1Q8N6Y0 703 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 UBXN4Q92575 508 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 UPF1Q92900 1129 aaKnown RBP eCLIP4.61□□□□□ -1.672e-7■■□□□ 11.4
UFM1-201ENST00000239878 MS4A4AQ96JQ5 239 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 STRN4Q9NRL3 753 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 KIF13BQ9NQT8 1826 aa4.61□□□□□ -1.67
UFM1-201ENST00000239878 SOCS7O14512 581 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 HTATSF1O43719 755 aaKnown RBP4.6□□□□□ -1.67
UFM1-201ENST00000239878 CLSTN1O94985 981 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 AMOTQ4VCS5 1084 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 PHACTR3Q96KR7 559 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 CAMKK2Q96RR4 588 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 MARCH6O60337 910 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 PHLDB3Q6NSJ2 640 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 PTF1AQ7RTS3 328 aa4.6□□□□□ -1.67
UFM1-201ENST00000239878 FRAT2O75474 233 aaPredicted RBP4.59□□□□□ -1.67
UFM1-201ENST00000239878 RFC5P40937 340 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 MTHFSDQ2M296 383 aaKnown RBP4.59□□□□□ -1.67
UFM1-201ENST00000239878 AKAP4Q5JQC9 854 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 ZCRB1Q8TBF4 217 aaKnown RBP4.59□□□□□ -1.67
UFM1-201ENST00000239878 ANKRD62A6NC57 917 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 ERVV-2B6SEH9 535 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 DPYSL4O14531 572 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 PLSCR1O15162 318 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 GPR37L1O60883 481 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 ZNF853P0CG23 659 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 CSB-PGBD3P0DP91 1061 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 DDB1Q16531 1140 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 TSR1Q2NL82 804 aaKnown RBP4.59□□□□□ -1.67
UFM1-201ENST00000239878 FAM196AQ6ZSG2 479 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 NLRP2Q9NX02 1062 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 TRIM35Q9UPQ4 493 aa4.59□□□□□ -1.67
UFM1-201ENST00000239878 SOX12O15370 315 aa4.59□□□□□ -1.68
UFM1-201ENST00000239878 TIE1P35590 1138 aa4.59□□□□□ -1.68
UFM1-201ENST00000239878 TNNT2P45379 298 aaPredicted RBP4.59□□□□□ -1.68
UFM1-201ENST00000239878 SLC4A3P48751 1232 aa4.59□□□□□ -1.68
UFM1-201ENST00000239878 EVA1CP58658 441 aa4.59□□□□□ -1.68
UFM1-201ENST00000239878 DMTNQ08495 405 aa4.59□□□□□ -1.68
UFM1-201ENST00000239878 IER5LQ5T953 404 aa4.59□□□□□ -1.68
UFM1-201ENST00000239878 SULT6B1Q6IMI4 303 aa4.59□□□□□ -1.68
UFM1-201ENST00000239878 RECKO95980 971 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 TPM2P07951 284 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 TATP17735 454 aaPredicted RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 NCLP19338 710 aaKnown RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 ZNF467Q7Z7K2 595 aaPredicted RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 NPAS4Q8IUM7 802 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 ANP32BQ92688 251 aaKnown RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 DCAF5Q96JK2 942 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 PHOX2BQ99453 314 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 TBC1D2Q9BYX2 928 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 MYH14Q7Z406 1995 aaKnown RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 RNMTO43148 476 aaKnown RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 OSBPP22059 807 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 UTP14CQ5TAP6 766 aaKnown RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 IL17REQ8NFR9 667 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 GPATCH3Q96I76 525 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 CFAP53Q96M91 514 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 BMP2KQ9NSY1 1161 aaPredicted RBP4.58□□□□□ -1.68
UFM1-201ENST00000239878 BABAM1Q9NWV8 329 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 ADAMTS8Q9UP79 889 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 SPG7Q9UQ90 795 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 PPME1Q9Y570 386 aa4.58□□□□□ -1.68
UFM1-201ENST00000239878 DLEC1Q9Y238 1755 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 IBTKQ9P2D0 1353 aaPredicted RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 ERBB4Q15303 1308 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 SEC24BO95487 1268 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 PRKAR2BP31323 418 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 PRIM1P49642 420 aaKnown RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 RIPK4P57078 832 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 IRX3P78415 501 aaPredicted RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 HNRNPUQ00839 825 aaKnown RBP eCLIP4.57□□□□□ -1.68
UFM1-201ENST00000239878 NFE2L2Q16236 605 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 EFCAB3Q8N7B9 438 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 SLC4A9Q96Q91 983 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 KRTAP3-3Q9BYR6 98 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 KRTAP3-2Q9BYR7 98 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 LAMB2P55268 1798 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 ANKRD36CQ5JPF3 1778 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 SPDYE16A6NNV3 312 aaPredicted RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 EXOC5O00471 708 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 ERCC3P19447 782 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 PLEKHO1Q53GL0 409 aaPredicted RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 MYSM1Q5VVJ2 828 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 PPP2R2DQ66LE6 453 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 IFNL2Q8IZJ0 200 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms