RNA–Protein interactions for RNA: ENST00000239367.6

LRP11-201, Transcript of LDL receptor related protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP11, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-201ENST00000239367 RUFY3Q7L099 469 aa19.43■□□□□ 0.7
LRP11-201ENST00000239367 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
LRP11-201ENST00000239367 TTC41PQ6P2S7 1318 aa19.42■□□□□ 0.7
LRP11-201ENST00000239367 GTF3C6Q969F1 213 aa19.42■□□□□ 0.7
LRP11-201ENST00000239367 SRGAP3O43295 1099 aa19.42■□□□□ 0.7
LRP11-201ENST00000239367 CEP135Q66GS9 1140 aa19.42■□□□□ 0.7
LRP11-201ENST00000239367 ERCC4Q92889 916 aaPredicted RBP19.42■□□□□ 0.7
LRP11-201ENST00000239367 NWD1Q149M9 1564 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 HOXC9P31274 260 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 CBX8Q9HC52 389 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 ZNF215Q9UL58 517 aaPredicted RBP19.41■□□□□ 0.7
LRP11-201ENST00000239367 PIK3C2AO00443 1686 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 GOLGA6L19H0YKK7 550 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 ELF2Q15723 593 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 FAM200AQ8TCP9 573 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 ANKRD7Q92527 254 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 PHAXQ9H814 394 aaKnown RBP19.41■□□□□ 0.7
LRP11-201ENST00000239367 PDRG1Q9NUG6 133 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 CTNNA3Q9UI47 895 aa19.41■□□□□ 0.7
LRP11-201ENST00000239367 POLR3GO15318 223 aaPredicted RBP19.4■□□□□ 0.7
LRP11-201ENST00000239367 RUFY2Q8WXA3 655 aa19.4■□□□□ 0.7
LRP11-201ENST00000239367 DDX11Q96FC9 970 aa19.4■□□□□ 0.7
LRP11-201ENST00000239367 LTKP29376 864 aa19.4■□□□□ 0.7
LRP11-201ENST00000239367 CERS3Q8IU89 383 aa19.4■□□□□ 0.7
LRP11-201ENST00000239367 CACTINQ8WUQ7 758 aaKnown RBP19.4■□□□□ 0.7
LRP11-201ENST00000239367 FEZ1Q99689 392 aa19.4■□□□□ 0.7
LRP11-201ENST00000239367 HOXB7P09629 217 aa19.4■□□□□ 0.7
LRP11-201ENST00000239367 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
LRP11-201ENST00000239367 ZNF165P49910 485 aa19.4■□□□□ 0.7
LRP11-201ENST00000239367 ZSCAN31Q96LW9 406 aaPredicted RBP19.4■□□□□ 0.7
LRP11-201ENST00000239367 USP27XA6NNY8 438 aa19.39■□□□□ 0.69
LRP11-201ENST00000239367 GLRX3O76003 335 aaKnown RBP19.39■□□□□ 0.69
LRP11-201ENST00000239367 TAF3Q5VWG9 929 aa19.39■□□□□ 0.69
LRP11-201ENST00000239367 FMNL2Q96PY5 1086 aa19.39■□□□□ 0.69
LRP11-201ENST00000239367 HYPKQ9NX55 129 aa19.39■□□□□ 0.69
LRP11-201ENST00000239367 VPS53Q5VIR6 699 aa19.39■□□□□ 0.69
LRP11-201ENST00000239367 TTC6Q86TZ1 520 aa19.39■□□□□ 0.69
LRP11-201ENST00000239367 BECN2A8MW95 431 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 ADCK5Q3MIX3 580 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 ZSCAN25Q6NSZ9 544 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 TM6SF1Q9BZW5 370 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 SH2B1Q9NRF2 756 aaPredicted RBP19.38■□□□□ 0.69
LRP11-201ENST00000239367 TPM3P06753 285 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 PDIA4P13667 645 aaKnown RBP19.38■□□□□ 0.69
LRP11-201ENST00000239367 FUCA2Q9BTY2 467 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 USP16Q9Y5T5 823 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 SMTNL1A8MU46 457 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 NLRP6P59044 892 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 BEND3Q5T5X7 828 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 KCNB2Q92953 911 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 SPATA32Q96LK8 384 aa19.38■□□□□ 0.69
LRP11-201ENST00000239367 KRT85P78386 507 aa19.37■□□□□ 0.69
LRP11-201ENST00000239367 PTPN14Q15678 1187 aa19.37■□□□□ 0.69
LRP11-201ENST00000239367 NBPF7P0C2Y1 421 aaPredicted RBP19.37■□□□□ 0.69
LRP11-201ENST00000239367 KRT222Q8N1A0 295 aa19.37■□□□□ 0.69
LRP11-201ENST00000239367 MTMR6Q9Y217 621 aa19.37■□□□□ 0.69
LRP11-201ENST00000239367 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
LRP11-201ENST00000239367 MRVI1Q9Y6F6 885 aa19.37■□□□□ 0.69
LRP11-201ENST00000239367 CEMIPQ8WUJ3 1361 aa19.37■□□□□ 0.69
LRP11-201ENST00000239367 CDC37L1Q7L3B6 337 aa19.36■□□□□ 0.69
LRP11-201ENST00000239367 DIP2AQ14689 1571 aa19.36■□□□□ 0.69
LRP11-201ENST00000239367 CCDC144BQ3MJ40 725 aa19.36■□□□□ 0.69
LRP11-201ENST00000239367 CCDC144CPQ8IYA2 1237 aa19.36■□□□□ 0.69
LRP11-201ENST00000239367 DNAAF4Q8WXU2 420 aa19.36■□□□□ 0.69
LRP11-201ENST00000239367 CCDC9Q9Y3X0 531 aaKnown RBP19.36■□□□□ 0.69
LRP11-201ENST00000239367 ZSWIM6Q9HCJ5 1215 aa19.36■□□□□ 0.69
LRP11-201ENST00000239367 MTX1Q13505 466 aa19.35■□□□□ 0.69
LRP11-201ENST00000239367 TCHHQ07283 1943 aa19.35■□□□□ 0.69
LRP11-201ENST00000239367 SLFN14P0C7P3 912 aa19.35■□□□□ 0.69
LRP11-201ENST00000239367 USP54Q70EL1 1684 aa19.35■□□□□ 0.69
LRP11-201ENST00000239367 SKILP12757 684 aa19.35■□□□□ 0.69
LRP11-201ENST00000239367 KMT5BQ4FZB7 885 aa19.35■□□□□ 0.69
LRP11-201ENST00000239367 FAM177A1Q8N128 213 aaPredicted RBP19.35■□□□□ 0.69
LRP11-201ENST00000239367 KIF18AQ8NI77 898 aa19.35■□□□□ 0.69
LRP11-201ENST00000239367 LTV1Q96GA3 475 aaPredicted RBP19.35■□□□□ 0.69
LRP11-201ENST00000239367 EIF4A1P60842 406 aaKnown RBP19.34■□□□□ 0.69
LRP11-201ENST00000239367 IRX5P78411 483 aaPredicted RBP19.34■□□□□ 0.69
LRP11-201ENST00000239367 SLC26A8Q96RN1 970 aa19.34■□□□□ 0.69
LRP11-201ENST00000239367 DDX41Q9UJV9 622 aaKnown RBP19.34■□□□□ 0.69
LRP11-201ENST00000239367 CYP46A1Q9Y6A2 500 aa19.34■□□□□ 0.69
LRP11-201ENST00000239367 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
LRP11-201ENST00000239367 CCDC66A2RUB6 948 aa19.34■□□□□ 0.69
LRP11-201ENST00000239367 CLASRPQ8N2M8 674 aaKnown RBP19.34■□□□□ 0.69
LRP11-201ENST00000239367 TBX22Q9Y458 520 aa19.34■□□□□ 0.69
LRP11-201ENST00000239367 CTIFO43310 598 aaKnown RBP19.33■□□□□ 0.69
LRP11-201ENST00000239367 ZNF75DP51815 510 aa19.33■□□□□ 0.69
LRP11-201ENST00000239367 TMX1Q9H3N1 280 aa19.33■□□□□ 0.69
LRP11-201ENST00000239367 ANKARQ7Z5J8 1434 aa19.33■□□□□ 0.69
LRP11-201ENST00000239367 TNNT3P45378 269 aaPredicted RBP19.33■□□□□ 0.68
LRP11-201ENST00000239367 PTH1RQ03431 593 aa19.33■□□□□ 0.68
LRP11-201ENST00000239367 GPATCH3Q96I76 525 aa19.33■□□□□ 0.68
LRP11-201ENST00000239367 MED1Q15648 1581 aaPredicted RBP19.33■□□□□ 0.68
LRP11-201ENST00000239367 TERF2Q15554 542 aa19.33■□□□□ 0.68
LRP11-201ENST00000239367 TIGD1Q96MW7 591 aa19.33■□□□□ 0.68
LRP11-201ENST00000239367 PI4KAP2A4QPH2 592 aa19.32■□□□□ 0.68
LRP11-201ENST00000239367 NR1I2O75469 434 aa19.32■□□□□ 0.68
LRP11-201ENST00000239367 ME3Q16798 604 aa19.32■□□□□ 0.68
LRP11-201ENST00000239367 PI4KAP1Q8N8J0 262 aa19.32■□□□□ 0.68
LRP11-201ENST00000239367 ECHDC1Q9NTX5 307 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms