RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TTC12Q9H892 705 aaPredicted RBP9.41□□□□□ -0.9
APOB-201ENST00000233242 GDPD2Q9HCC8 539 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 STIM2Q9P246 746 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 AQRO60306 1485 aaKnown RBP eCLIP9.41□□□□□ -0.94e-12■■■■■ 39.5
APOB-201ENST00000233242 SREK1Q8WXA9 508 aaKnown RBP9.41□□□□□ -0.9
APOB-201ENST00000233242 LMBR1Q8WVP7 490 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.4□□□□□ -0.9
APOB-201ENST00000233242 ANKRD24Q8TF21 1146 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 F13A1P00488 732 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 ZNF445P59923 1031 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 SAMD15Q9P1V8 674 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.9
APOB-201ENST00000233242 PRAM1Q96QH2 718 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 SWAP70Q9UH65 585 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 CPLX3Q8WVH0 158 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 TSGA10Q9BZW7 698 aa9.4□□□□□ -0.9
APOB-201ENST00000233242 CLGNO14967 610 aa9.4□□□□□ -0.91
APOB-201ENST00000233242 SARNPP82979 210 aaKnown RBP9.4□□□□□ -0.91
APOB-201ENST00000233242 LACTBP83111 547 aaPredicted RBP9.4□□□□□ -0.91
APOB-201ENST00000233242 VPS18Q9P253 973 aa9.4□□□□□ -0.91
APOB-201ENST00000233242 BIN1O00499 593 aa9.4□□□□□ -0.91
APOB-201ENST00000233242 DHX37Q8IY37 1157 aaKnown RBP9.4□□□□□ -0.91
APOB-201ENST00000233242 IKBKGQ9Y6K9 419 aa9.4□□□□□ -0.91
APOB-201ENST00000233242 C10orf67Q8IYJ2 551 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 CDK19Q9BWU1 502 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 MTMR7Q9Y216 660 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 ZNF830Q96NB3 372 aaPredicted RBP9.39□□□□□ -0.91
APOB-201ENST00000233242 CNPY2Q9Y2B0 182 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 ZSWIM4Q9H7M6 989 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 AFAP1L1Q8TED9 768 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 SYNJ2O15056 1496 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 ABTB2Q8N961 1025 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 MYO1BO43795 1136 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 CCDC194A0A1B0GVG4 234 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 SMARCA5O60264 1052 aaPredicted RBP9.39□□□□□ -0.91
APOB-201ENST00000233242 IGHDP01880 384 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 CNGA4Q8IV77 575 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 ZFP91Q96JP5 570 aaPredicted RBP9.39□□□□□ -0.91
APOB-201ENST00000233242 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
APOB-201ENST00000233242 STRN4Q9NRL3 753 aa9.39□□□□□ -0.91
APOB-201ENST00000233242 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
APOB-201ENST00000233242 GNAT3A8MTJ3 354 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 STXBP4Q6ZWJ1 553 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 RTEL1-TNFRSF6BF6WH68 1400 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 TATP17735 454 aaPredicted RBP9.38□□□□□ -0.91
APOB-201ENST00000233242 SMC6Q96SB8 1091 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 PPP2R3AQ06190 1150 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 SETDB1Q15047 1291 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 CTNNBL1Q8WYA6 563 aaPredicted RBP9.38□□□□□ -0.91
APOB-201ENST00000233242 NEK1Q96PY6 1258 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 KIF5AQ12840 1032 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 NAA25Q14CX7 972 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 LMNTD2Q8IXW0 634 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 A0A1W2PRG0 241 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 MAP3K9P80192 1104 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 CPLX4Q7Z7G2 160 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 SYTL4Q96C24 671 aaPredicted RBP9.38□□□□□ -0.91
APOB-201ENST00000233242 NAPBQ9H115 298 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 RRAGDQ9NQL2 400 aaPredicted RBP9.38□□□□□ -0.91
APOB-201ENST00000233242 KRBA2Q6ZNG9 492 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 SCLT1Q96NL6 688 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 DACT1Q9NYF0 836 aa9.38□□□□□ -0.91
APOB-201ENST00000233242 INPP5BP32019 993 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 CROCCP2Q86T23 111 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 TOP2BQ02880 1626 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 TNIP1Q15025 636 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 USP16Q9Y5T5 823 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 GOLGA8AA7E2F4 631 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 TMCO5BA8MYB1 307 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 ZFYP08048 801 aaPredicted RBP9.37□□□□□ -0.91
APOB-201ENST00000233242 CCDC40Q4G0X9 1142 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 CALML4Q96GE6 196 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 FMNL3Q8IVF7 1028 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 JAKMIP2Q96AA8 810 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 ZMYM3Q14202 1370 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 PTGS1P23219 599 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 IQCA1Q86XH1 822 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 PAIP2Q9BPZ3 127 aaKnown RBP9.37□□□□□ -0.91
APOB-201ENST00000233242 FERMT1Q9BQL6 677 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 CAMSAP2Q08AD1 1489 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 BTBD11A6QL63 1104 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 SDSP20132 328 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 ALDH3A1P30838 453 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 NOP2P46087 812 aaKnown RBP9.37□□□□□ -0.91
APOB-201ENST00000233242 PAF1Q8N7H5 531 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 FERP16591 822 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 TTF1Q15361 905 aaPredicted RBP9.37□□□□□ -0.91
APOB-201ENST00000233242 LRP2BPQ9P2M1 347 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 KIF3CO14782 793 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 TTC21AQ8NDW8 1320 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 ZNF500O60304 480 aaPredicted RBP9.37□□□□□ -0.91
APOB-201ENST00000233242 IARSP41252 1262 aaKnown RBP9.37□□□□□ -0.91
APOB-201ENST00000233242 MATR3P43243 847 aaKnown RBP eCLIP9.37□□□□□ -0.91
APOB-201ENST00000233242 TNNC1P63316 161 aa9.37□□□□□ -0.91
APOB-201ENST00000233242 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms