RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 USP6P35125 1406 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 CLTCL1P53675 1640 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 NUCB2P80303 420 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 AATKQ6ZMQ8 1374 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 RABEP1Q15276 862 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 PLBD2Q8NHP8 589 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 WASF1Q92558 559 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 SOS2Q07890 1332 aaPredicted RBP9.48□□□□□ -0.89
NANOG-201ENST00000229307 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
NANOG-201ENST00000229307 CREBRFQ8IUR6 639 aa9.48□□□□□ -0.89
NANOG-201ENST00000229307 CEP89Q96ST8 783 aa9.48□□□□□ -0.89
NANOG-201ENST00000229307 MST1RQ04912 1400 aa9.48□□□□□ -0.89
NANOG-201ENST00000229307 TXLNAP40222 546 aa9.48□□□□□ -0.89
NANOG-201ENST00000229307 ARHGEF25Q86VW2 580 aa9.48□□□□□ -0.89
NANOG-201ENST00000229307 IPO9Q96P70 1041 aaKnown RBP9.48□□□□□ -0.89
NANOG-201ENST00000229307 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
NANOG-201ENST00000229307 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
NANOG-201ENST00000229307 PDE6BP35913 854 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
NANOG-201ENST00000229307 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
NANOG-201ENST00000229307 CDK5RAP3Q96JB5 506 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 CRNKL1Q9BZJ0 848 aaKnown RBP9.47□□□□□ -0.89
NANOG-201ENST00000229307 PNPLA6Q8IY17 1366 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 SKOR2Q2VWA4 1001 aaPredicted RBP9.47□□□□□ -0.89
NANOG-201ENST00000229307 SH3TC1Q8TE82 1336 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 MAP4K4O95819 1239 aaPredicted RBP9.47□□□□□ -0.89
NANOG-201ENST00000229307 ANXA1P04083 346 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 TPM1P09493 284 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 PHKG2P15735 406 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 ALDH1B1P30837 517 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 ATP2B3Q16720 1220 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 CDC42BPGQ6DT37 1551 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 PLCG2P16885 1265 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 BLOC1S2Q6QNY1 142 aa9.47□□□□□ -0.89
NANOG-201ENST00000229307 TNS3Q68CZ2 1445 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 TRIM27P14373 513 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 IQCA1Q86XH1 822 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 BOLA2Q9H3K6 86 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 ECHDC1Q9NTX5 307 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 NOL7Q9UMY1 257 aaKnown RBP9.46□□□□□ -0.89
NANOG-201ENST00000229307 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 CCDC178Q5BJE1 867 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 CCDC73Q6ZRK6 1079 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 EVI5LQ96CN4 794 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.89
NANOG-201ENST00000229307 SEC63Q9UGP8 760 aaKnown RBP9.46□□□□□ -0.89
NANOG-201ENST00000229307 ZFYP08048 801 aaPredicted RBP9.46□□□□□ -0.9
NANOG-201ENST00000229307 TNNI2P48788 182 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 EIF6P56537 245 aaKnown RBP9.46□□□□□ -0.9
NANOG-201ENST00000229307 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.9
NANOG-201ENST00000229307 CCDC191Q8NCU4 936 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 MPHOSPH6Q99547 160 aaKnown RBP9.46□□□□□ -0.9
NANOG-201ENST00000229307 PTPRUQ92729 1446 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 MINDY4BA8MYZ0 360 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 PDE4BQ07343 736 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 LMBR1LQ6UX01 489 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 NLGN1Q8N2Q7 840 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 BICD2Q8TD16 824 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 ZSCAN31Q96LW9 406 aaPredicted RBP9.46□□□□□ -0.9
NANOG-201ENST00000229307 CCDC8Q9H0W5 538 aaPredicted RBP9.46□□□□□ -0.9
NANOG-201ENST00000229307 NWD1Q149M9 1564 aa9.46□□□□□ -0.9
NANOG-201ENST00000229307 CCDC196A0A1B0GTZ2 297 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 PES1O00541 588 aaKnown RBP9.45□□□□□ -0.9
NANOG-201ENST00000229307 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
NANOG-201ENST00000229307 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
NANOG-201ENST00000229307 SEPT12Q8IYM1 358 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 STK11IPQ8N1F8 1099 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 ZNF396Q96N95 335 aaPredicted RBP9.45□□□□□ -0.9
NANOG-201ENST00000229307 FEZ1Q99689 392 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 ERBB4Q15303 1308 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 PHLPP1O60346 1717 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 TNIP1Q15025 636 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
NANOG-201ENST00000229307 NSFL1CQ9UNZ2 370 aaKnown RBP9.45□□□□□ -0.9
NANOG-201ENST00000229307 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 NEK4P51957 841 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 TRAF1Q13077 416 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 JMYQ8N9B5 988 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 C8orf58Q8NAV2 365 aa9.45□□□□□ -0.9
NANOG-201ENST00000229307 MED1Q15648 1581 aaPredicted RBP9.44□□□□□ -0.9
NANOG-201ENST00000229307 TPM3P06753 285 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 GOLGA6L19H0YKK7 550 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 PDE8AO60658 829 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 VPS72Q15906 364 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 LAMC1P11047 1609 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
NANOG-201ENST00000229307 ZNF76P36508 570 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 HOOK2Q96ED9 719 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 MAST3O60307 1309 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 BECN2A8MW95 431 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 DNAJC10Q8IXB1 793 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 CUL5Q93034 780 aa9.44□□□□□ -0.9
NANOG-201ENST00000229307 METTL22Q9BUU2 404 aaPredicted RBP9.44□□□□□ -0.9
NANOG-201ENST00000229307 ZNF213O14771 459 aa9.43□□□□□ -0.9
NANOG-201ENST00000229307 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
NANOG-201ENST00000229307 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
NANOG-201ENST00000229307 CTCFLQ8NI51 663 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms