RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 SPATA31D1Q6ZQQ2 1576 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 TPM3P06753 285 aa13.58□□□□□ -0.23
CCND1-201ENST00000227507 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.23
CCND1-201ENST00000227507 DNAAF4Q8WXU2 420 aa13.58□□□□□ -0.23
CCND1-201ENST00000227507 NOL10Q9BSC4 688 aaKnown RBP13.58□□□□□ -0.23
CCND1-201ENST00000227507 ZSCAN22P10073 491 aaPredicted RBP13.58□□□□□ -0.24
CCND1-201ENST00000227507 NEXMIFQ5QGS0 1516 aa13.58□□□□□ -0.24
CCND1-201ENST00000227507 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
CCND1-201ENST00000227507 CASTP20810 708 aaKnown RBP13.58□□□□□ -0.24
CCND1-201ENST00000227507 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
CCND1-201ENST00000227507 NUP62CLQ9H1M0 184 aa13.58□□□□□ -0.24
CCND1-201ENST00000227507 CCDC66A2RUB6 948 aa13.58□□□□□ -0.24
CCND1-201ENST00000227507 AK7Q96M32 723 aa13.58□□□□□ -0.24
CCND1-201ENST00000227507 LAMC1P11047 1609 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 SYT1P21579 422 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 ARHGEF25Q86VW2 580 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 MYD88Q99836 296 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 AATKQ6ZMQ8 1374 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 PTPRCP08575 1304 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
CCND1-201ENST00000227507 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 STK3Q13188 491 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 MAP3K11Q16584 847 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 MPHOSPH8Q99549 860 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 TOMM22Q9NS69 142 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 PPP1R1BQ9UD71 204 aaPredicted RBP13.57□□□□□ -0.24
CCND1-201ENST00000227507 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 SETBP1Q9Y6X0 1596 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 LARP1BQ659C4 914 aaKnown RBP13.57□□□□□ -0.24
CCND1-201ENST00000227507 NECAB1Q8N987 351 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 ZBTB9Q96C00 473 aa13.57□□□□□ -0.24
CCND1-201ENST00000227507 ZBTB3Q9H5J0 574 aa13.56□□□□□ -0.24
CCND1-201ENST00000227507 OGFRQ9NZT2 677 aa13.56□□□□□ -0.24
CCND1-201ENST00000227507 KIAA1524Q8TCG1 905 aa13.56□□□□□ -0.24
CCND1-201ENST00000227507 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
CCND1-201ENST00000227507 GJB2P29033 226 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
CCND1-201ENST00000227507 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
CCND1-201ENST00000227507 NRBP1Q9UHY1 535 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 VWDEQ8N2E2 1590 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 PTCH1Q13635 1447 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 CLIP2Q9UDT6 1046 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 ANXA1P04083 346 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 CHMLP26374 656 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 ABCC4O15439 1325 aa13.55□□□□□ -0.24
CCND1-201ENST00000227507 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 SIL1Q9H173 461 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 F13A1P00488 732 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 INTS4Q96HW7 963 aaKnown RBP13.54□□□□□ -0.24
CCND1-201ENST00000227507 DEPDC5O75140 1603 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 AK2P54819 239 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 KRT85P78386 507 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
CCND1-201ENST00000227507 FEZ1Q99689 392 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 A0A087WZG4 1122 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 POLR3GO15318 223 aaPredicted RBP13.53□□□□□ -0.24
CCND1-201ENST00000227507 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 DACT1Q9NYF0 836 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
CCND1-201ENST00000227507 CEP126Q9P2H0 1117 aa13.53□□□□□ -0.24
CCND1-201ENST00000227507 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
CCND1-201ENST00000227507 ZNF165P49910 485 aa13.52□□□□□ -0.24
CCND1-201ENST00000227507 PRPF40BQ6NWY9 871 aaKnown RBP13.52□□□□□ -0.24
CCND1-201ENST00000227507 ANKRD13DQ6ZTN6 518 aa13.52□□□□□ -0.24
CCND1-201ENST00000227507 G2E3Q7L622 706 aa13.52□□□□□ -0.24
CCND1-201ENST00000227507 UNC5CLQ8IV45 518 aa13.52□□□□□ -0.24
CCND1-201ENST00000227507 KRT222Q8N1A0 295 aa13.52□□□□□ -0.24
CCND1-201ENST00000227507 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.24
CCND1-201ENST00000227507 CCDC85AQ96PX6 553 aaPredicted RBP13.52□□□□□ -0.24
CCND1-201ENST00000227507 CHPF2Q9P2E5 772 aa13.52□□□□□ -0.24
CCND1-201ENST00000227507 H3BQV1 296 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 PDRG1Q9NUG6 133 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 KCNG1Q9UIX4 513 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 RTL1A6NKG5 1358 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
CCND1-201ENST00000227507 GPTP24298 496 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCND1-201ENST00000227507 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
CCND1-201ENST00000227507 TYRO3Q06418 890 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 SPATA32Q96LK8 384 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.25
CCND1-201ENST00000227507 AMOTL1Q8IY63 956 aa13.51□□□□□ -0.25
CCND1-201ENST00000227507 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
CCND1-201ENST00000227507 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
CCND1-201ENST00000227507 PPFIA3O75145 1194 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms