RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 GRM8O00222 908 aa16.03■□□□□ 0.16
NFKB1-201ENST00000226574 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
NFKB1-201ENST00000226574 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
NFKB1-201ENST00000226574 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
NFKB1-201ENST00000226574 RXRAP19793 462 aa16.02■□□□□ 0.16
NFKB1-201ENST00000226574 LRMPQ12912 555 aa16.02■□□□□ 0.16
NFKB1-201ENST00000226574 SNW1Q13573 536 aaKnown RBP16.02■□□□□ 0.16
NFKB1-201ENST00000226574 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
NFKB1-201ENST00000226574 CCDC102AQ96A19 550 aa16.02■□□□□ 0.15
NFKB1-201ENST00000226574 NCOA5Q9HCD5 579 aaKnown RBP16.02■□□□□ 0.15
NFKB1-201ENST00000226574 PRDM11Q9NQV5 511 aa16.02■□□□□ 0.15
NFKB1-201ENST00000226574 DNAI1Q9UI46 699 aa16.02■□□□□ 0.15
NFKB1-201ENST00000226574 CTNNA3Q9UI47 895 aa16.02■□□□□ 0.15
NFKB1-201ENST00000226574 EIF2AK4Q9P2K8 1649 aaKnown RBP16.01■□□□□ 0.15
NFKB1-201ENST00000226574 SGSM2O43147 1006 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 PPP1R9BQ96SB3 815 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 XBP1P17861 261 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 STX1AQ16623 288 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 ANKRD13DQ6ZTN6 518 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 RASEFQ8IZ41 740 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 TRIM34Q9BYJ4 488 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.01■□□□□ 0.15
NFKB1-201ENST00000226574 ABCC4O15439 1325 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 RIMS2Q9UQ26 1411 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 DHX8Q14562 1220 aaKnown RBP16.01■□□□□ 0.15
NFKB1-201ENST00000226574 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
NFKB1-201ENST00000226574 JAK2O60674 1132 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 ERVK-7P63135 1459 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 NPATQ14207 1427 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 A0A1B0GVL5 298 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 ZNF213O14771 459 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 ARHGAP29Q52LW3 1261 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 AIDAQ96BJ3 306 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 MPHOSPH8Q99549 860 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 A0A087WWV3 80 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 SMTNL1A8MU46 457 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 TIMM10P62072 90 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 CNNM3Q8NE01 707 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 USP44Q9H0E7 712 aa16■□□□□ 0.15
NFKB1-201ENST00000226574 KIF6Q6ZMV9 814 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 NPHP3Q7Z494 1330 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 RTL1A6NKG5 1358 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 KCNQ3O43525 872 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 RUFY3Q7L099 469 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 PTH1RQ03431 593 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 BICC1Q9H694 974 aaKnown RBP15.99■□□□□ 0.15
NFKB1-201ENST00000226574 LIG1P18858 919 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 GNG11P61952 73 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 RUFY1Q96T51 708 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 LRP2BPQ9P2M1 347 aa15.99■□□□□ 0.15
NFKB1-201ENST00000226574 ASXL2Q76L83 1435 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 KIF4BQ2VIQ3 1234 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 SLC4A8Q2Y0W8 1093 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 KSR2Q6VAB6 950 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
NFKB1-201ENST00000226574 CCDC94Q9BW85 323 aaPredicted RBP15.98■□□□□ 0.15
NFKB1-201ENST00000226574 BRMS1Q9HCU9 246 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
NFKB1-201ENST00000226574 G3V3G9 751 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 DCAF8Q5TAQ9 597 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 NFATC2IPQ8NCF5 419 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 UBAC1Q9BSL1 405 aa15.98■□□□□ 0.15
NFKB1-201ENST00000226574 DNA2P51530 1060 aa15.97■□□□□ 0.15
NFKB1-201ENST00000226574 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
NFKB1-201ENST00000226574 LEKR1Q6ZMV7 388 aa15.97■□□□□ 0.15
NFKB1-201ENST00000226574 CCDC47Q96A33 483 aaKnown RBP15.97■□□□□ 0.15
NFKB1-201ENST00000226574 IQSEC3Q9UPP2 1182 aaPredicted RBP15.97■□□□□ 0.15
NFKB1-201ENST00000226574 CCP110O43303 1012 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 CBFA2T2O43439 604 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 ME3Q16798 604 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 ADCK5Q3MIX3 580 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 CBX8Q9HC52 389 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 IFIT3O14879 490 aaKnown RBP15.96■□□□□ 0.15
NFKB1-201ENST00000226574 TFCP2Q12800 502 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 KCNH5Q8NCM2 988 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 IFNKQ9P0W0 207 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 CTAGE5O15320 804 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 EPB41L2O43491 1005 aaKnown RBP15.96■□□□□ 0.15
NFKB1-201ENST00000226574 SYT10Q6XYQ8 523 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 SMARCE1Q969G3 411 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 RAI14Q9P0K7 980 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 SBNO2Q9Y2G9 1366 aa15.96■□□□□ 0.15
NFKB1-201ENST00000226574 HSPA4P34932 840 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 UBASH3AP57075 661 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 AMOTQ4VCS5 1084 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 NAPBQ9H115 298 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 RAD50Q92878 1312 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 LDHAL6AQ6ZMR3 332 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 ABCC1P33527 1531 aa15.95■□□□□ 0.14
NFKB1-201ENST00000226574 BICDL1Q6ZP65 573 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 LINS1Q8NG48 757 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms