RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 AIMP1Q12904 312 aaKnown RBP17.53■□□□□ 0.4
UPK1A-201ENST00000222275 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
UPK1A-201ENST00000222275 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
UPK1A-201ENST00000222275 NUP98P52948 1817 aa17.52■□□□□ 0.4
UPK1A-201ENST00000222275 POTECB2RU33 542 aa17.52■□□□□ 0.4
UPK1A-201ENST00000222275 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
UPK1A-201ENST00000222275 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
UPK1A-201ENST00000222275 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
UPK1A-201ENST00000222275 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.4
UPK1A-201ENST00000222275 ELL2O00472 640 aaPredicted RBP17.51■□□□□ 0.39
UPK1A-201ENST00000222275 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
UPK1A-201ENST00000222275 CRY2Q49AN0 593 aa17.51■□□□□ 0.39
UPK1A-201ENST00000222275 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
UPK1A-201ENST00000222275 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
UPK1A-201ENST00000222275 EXOSC9Q06265 439 aaKnown RBP17.5■□□□□ 0.39
UPK1A-201ENST00000222275 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
UPK1A-201ENST00000222275 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
UPK1A-201ENST00000222275 PCNTO95613 3336 aa17.5■□□□□ 0.39
UPK1A-201ENST00000222275 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
UPK1A-201ENST00000222275 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
UPK1A-201ENST00000222275 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
UPK1A-201ENST00000222275 GLTPD2A6NH11 291 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 TOMM70O94826 608 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 TCIRG1Q13488 830 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 SLC10A5Q5PT55 438 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 TSPYL6Q8N831 410 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 NYXQ9GZU5 481 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
UPK1A-201ENST00000222275 VAMP4O75379 141 aa17.47■□□□□ 0.39
UPK1A-201ENST00000222275 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
UPK1A-201ENST00000222275 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
UPK1A-201ENST00000222275 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
UPK1A-201ENST00000222275 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
UPK1A-201ENST00000222275 HCLS1P14317 486 aaPredicted RBP17.46■□□□□ 0.39
UPK1A-201ENST00000222275 HSPA6P17066 643 aa17.46■□□□□ 0.39
UPK1A-201ENST00000222275 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
UPK1A-201ENST00000222275 PHAXQ9H814 394 aaKnown RBP17.46■□□□□ 0.39
UPK1A-201ENST00000222275 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
UPK1A-201ENST00000222275 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
UPK1A-201ENST00000222275 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
UPK1A-201ENST00000222275 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
UPK1A-201ENST00000222275 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
UPK1A-201ENST00000222275 IBTKQ9P2D0 1353 aaPredicted RBP17.44■□□□□ 0.38
UPK1A-201ENST00000222275 ATP5J2-PTCD1G3V325 749 aa17.44■□□□□ 0.38
UPK1A-201ENST00000222275 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
UPK1A-201ENST00000222275 DDNO94850 711 aaPredicted RBP17.44■□□□□ 0.38
UPK1A-201ENST00000222275 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
UPK1A-201ENST00000222275 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
UPK1A-201ENST00000222275 CCDC93Q567U6 631 aa17.44■□□□□ 0.38
UPK1A-201ENST00000222275 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
UPK1A-201ENST00000222275 CACNA1FO60840 1977 aa17.43■□□□□ 0.38
UPK1A-201ENST00000222275 HTRA3P83110 453 aa17.43■□□□□ 0.38
UPK1A-201ENST00000222275 PPP1R42Q7Z4L9 355 aa17.43■□□□□ 0.38
UPK1A-201ENST00000222275 PLBD2Q8NHP8 589 aa17.43■□□□□ 0.38
UPK1A-201ENST00000222275 CACNA1SQ13698 1873 aa17.43■□□□□ 0.38
UPK1A-201ENST00000222275 ZC3H4Q9UPT8 1303 aaKnown RBP17.43■□□□□ 0.38
UPK1A-201ENST00000222275 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.38
UPK1A-201ENST00000222275 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
UPK1A-201ENST00000222275 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
UPK1A-201ENST00000222275 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
UPK1A-201ENST00000222275 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
UPK1A-201ENST00000222275 SOGA3Q5TF21 947 aa17.41■□□□□ 0.38
UPK1A-201ENST00000222275 DNAJC5GQ8N7S2 189 aa17.41■□□□□ 0.38
UPK1A-201ENST00000222275 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
UPK1A-201ENST00000222275 RIC1Q4ADV7 1423 aa17.4■□□□□ 0.38
UPK1A-201ENST00000222275 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
UPK1A-201ENST00000222275 POTEIP0CG38 1075 aa17.4■□□□□ 0.38
UPK1A-201ENST00000222275 POTEJP0CG39 1038 aa17.4■□□□□ 0.38
UPK1A-201ENST00000222275 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
UPK1A-201ENST00000222275 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
UPK1A-201ENST00000222275 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
UPK1A-201ENST00000222275 NLRP3Q96P20 1036 aa17.4■□□□□ 0.38
UPK1A-201ENST00000222275 COL4A5P29400 1685 aa17.39■□□□□ 0.37
UPK1A-201ENST00000222275 ARFGEF2Q9Y6D5 1785 aa17.39■□□□□ 0.37
UPK1A-201ENST00000222275 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
UPK1A-201ENST00000222275 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
UPK1A-201ENST00000222275 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.37
UPK1A-201ENST00000222275 JARID2Q92833 1246 aaPredicted RBP17.39■□□□□ 0.37
UPK1A-201ENST00000222275 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.37
UPK1A-201ENST00000222275 ABCC4O15439 1325 aa17.39■□□□□ 0.37
UPK1A-201ENST00000222275 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
UPK1A-201ENST00000222275 G2E3Q7L622 706 aa17.38■□□□□ 0.37
UPK1A-201ENST00000222275 DICER1Q9UPY3 1922 aaKnown RBP17.37■□□□□ 0.37
UPK1A-201ENST00000222275 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
UPK1A-201ENST00000222275 TRIM28Q13263 835 aaKnown RBP17.37■□□□□ 0.37
UPK1A-201ENST00000222275 DPY19L2Q6NUT2 758 aa17.37■□□□□ 0.37
UPK1A-201ENST00000222275 PSMD1Q99460 953 aa17.37■□□□□ 0.37
UPK1A-201ENST00000222275 FZD9O00144 591 aa17.36■□□□□ 0.37
UPK1A-201ENST00000222275 PPEF1O14829 653 aaPredicted RBP17.36■□□□□ 0.37
UPK1A-201ENST00000222275 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
UPK1A-201ENST00000222275 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
UPK1A-201ENST00000222275 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
UPK1A-201ENST00000222275 COL4A1P02462 1669 aa17.36■□□□□ 0.37
UPK1A-201ENST00000222275 FSTL1Q12841 308 aa17.35■□□□□ 0.37
UPK1A-201ENST00000222275 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
UPK1A-201ENST00000222275 SMC4Q9NTJ3 1288 aa17.35■□□□□ 0.37
UPK1A-201ENST00000222275 TIAM2Q8IVF5 1701 aa17.35■□□□□ 0.37
UPK1A-201ENST00000222275 TAF1P21675 1872 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms