RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 PFDN1O60925 122 aa12.66□□□□□ -0.38
USP31-201ENST00000219689 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
USP31-201ENST00000219689 SEC62Q99442 399 aaKnown RBP12.66□□□□□ -0.38
USP31-201ENST00000219689 CAVIN2O95810 425 aa12.66□□□□□ -0.38
USP31-201ENST00000219689 DBN1Q16643 649 aa12.66□□□□□ -0.38
USP31-201ENST00000219689 TDRD12Q587J7 1177 aaKnown RBP12.66□□□□□ -0.38
USP31-201ENST00000219689 RPSAP08865 295 aaKnown RBP12.66□□□□□ -0.38
USP31-201ENST00000219689 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
USP31-201ENST00000219689 AACSQ86V21 672 aa12.66□□□□□ -0.38
USP31-201ENST00000219689 MAP1BP46821 2468 aaKnown RBP12.66□□□□□ -0.38
USP31-201ENST00000219689 RFC1P35251 1148 aaPredicted RBP12.65□□□□□ -0.38
USP31-201ENST00000219689 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.383e-8■■■■□ 25.6
USP31-201ENST00000219689 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
USP31-201ENST00000219689 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.38
USP31-201ENST00000219689 CACNA2D3Q8IZS8 1091 aa12.65□□□□□ -0.38
USP31-201ENST00000219689 IFT74Q96LB3 600 aa12.65□□□□□ -0.38
USP31-201ENST00000219689 PPP1R14CQ8TAE6 165 aa12.65□□□□□ -0.38
USP31-201ENST00000219689 EFCC1Q9HA90 598 aa12.65□□□□□ -0.38
USP31-201ENST00000219689 TACC1O75410 805 aa12.65□□□□□ -0.38
USP31-201ENST00000219689 ARHGAP25P42331 645 aa12.65□□□□□ -0.38
USP31-201ENST00000219689 TTC39AQ5SRH9 613 aa12.65□□□□□ -0.38
USP31-201ENST00000219689 NUTM1Q86Y26 1132 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 SCAPERQ9BY12 1400 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 ERCC3P19447 782 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 TBC1D31Q96DN5 1066 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
USP31-201ENST00000219689 UBLCP1Q8WVY7 318 aaPredicted RBP12.64□□□□□ -0.39
USP31-201ENST00000219689 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
USP31-201ENST00000219689 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
USP31-201ENST00000219689 MLECQ14165 292 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 C8orf76Q96K31 380 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
USP31-201ENST00000219689 N4BP2L2Q92802 583 aaPredicted RBP12.64□□□□□ -0.39
USP31-201ENST00000219689 MYO1BO43795 1136 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 KRT32Q14532 448 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 PNMA8AQ86V59 439 aaPredicted RBP12.64□□□□□ -0.39
USP31-201ENST00000219689 VCXQ9H320 206 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 SLC24A3Q9HC58 644 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
USP31-201ENST00000219689 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 GOLGA5Q8TBA6 731 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 RP1L1Q8IWN7 2480 aaPredicted RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 IKQ13123 557 aaPredicted RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 STK38LQ9Y2H1 464 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 HGSO14964 777 aaPredicted RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 BIRC2Q13490 618 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 CCDC170Q8IYT3 715 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 RPUSD2Q8IZ73 545 aaKnown RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 RABGAP1Q9Y3P9 1069 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 CCDC158Q5M9N0 1113 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 INTS8Q75QN2 995 aaKnown RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 CIB2O75838 187 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 DESP17661 470 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 SNCBQ16143 134 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 STMN4Q9H169 189 aaPredicted RBP12.63□□□□□ -0.39
USP31-201ENST00000219689 KCNK9Q9NPC2 374 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
USP31-201ENST00000219689 IFNKQ9P0W0 207 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 SMIM24O75264 130 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 SOGA3Q5TF21 947 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 TRIM7Q9C029 511 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 KIF21BO75037 1637 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 LRPPRCP42704 1394 aaKnown RBP12.62□□□□□ -0.39
USP31-201ENST00000219689 CHMP4BP1P59074 171 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 BAIAP2L1Q9UHR4 511 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 IL1RAPL2Q9NP60 686 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 PLEKHA4Q9H4M7 779 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 CETN2P41208 172 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 TUBB4BP68371 445 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 CCDC38Q502W7 563 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 SPTY2D1Q68D10 685 aaPredicted RBP12.62□□□□□ -0.39
USP31-201ENST00000219689 CETN3O15182 167 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 IKBKGQ9Y6K9 419 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 TSG101Q99816 390 aa12.62□□□□□ -0.39
USP31-201ENST00000219689 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 PPFIBP2Q8ND30 876 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
USP31-201ENST00000219689 RAB11FIP3O75154 756 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 CARD6Q9BX69 1037 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 CFAP58Q5T655 872 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 TMX3Q96JJ7 454 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 SELENOOQ9BVL4 669 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 GUCA1BQ9UMX6 200 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 E7EVH7 732 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
USP31-201ENST00000219689 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
USP31-201ENST00000219689 SETDB1Q15047 1291 aa12.61□□□□□ -0.39
USP31-201ENST00000219689 RNF10Q8N5U6 811 aaKnown RBP12.61□□□□□ -0.39
USP31-201ENST00000219689 JPH2Q9BR39 696 aaPredicted RBP12.61□□□□□ -0.39
USP31-201ENST00000219689 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
USP31-201ENST00000219689 JRKLQ9Y4A0 524 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms