RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
CDKN3-201ENST00000216414 PPP1R12BO60237 982 aaPredicted RBP6.48□□□□□ -1.37
CDKN3-201ENST00000216414 LILRB5O75023 590 aa6.48□□□□□ -1.37
CDKN3-201ENST00000216414 HIRAP54198 1017 aaPredicted RBP6.48□□□□□ -1.37
CDKN3-201ENST00000216414 C20orf204Q6ZNR8 217 aa6.48□□□□□ -1.37
CDKN3-201ENST00000216414 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
CDKN3-201ENST00000216414 OGFOD1Q8N543 542 aa6.48□□□□□ -1.37
CDKN3-201ENST00000216414 TSEN2Q8NCE0 465 aaKnown RBP6.48□□□□□ -1.37
CDKN3-201ENST00000216414 RBM19Q9Y4C8 960 aaKnown RBP6.48□□□□□ -1.37
CDKN3-201ENST00000216414 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
CDKN3-201ENST00000216414 KCNQ4P56696 695 aa6.47□□□□□ -1.37
CDKN3-201ENST00000216414 NRG1Q02297 640 aaPredicted RBP6.47□□□□□ -1.37
CDKN3-201ENST00000216414 ADAMTS19Q8TE59 1207 aa6.47□□□□□ -1.37
CDKN3-201ENST00000216414 NGLY1Q96IV0 654 aa6.47□□□□□ -1.37
CDKN3-201ENST00000216414 ZNF594Q96JF6 807 aaPredicted RBP6.47□□□□□ -1.37
CDKN3-201ENST00000216414 JPH1Q9HDC5 661 aaPredicted RBP6.47□□□□□ -1.37
CDKN3-201ENST00000216414 MKRN1Q9UHC7 482 aaKnown RBP6.47□□□□□ -1.37
CDKN3-201ENST00000216414 PALM3A6NDB9 673 aaPredicted RBP6.46□□□□□ -1.38
CDKN3-201ENST00000216414 ATP9BO43861 1147 aa6.46□□□□□ -1.38
CDKN3-201ENST00000216414 UBTFP17480 764 aaKnown RBP6.46□□□□□ -1.38
CDKN3-201ENST00000216414 HDGFL1Q5TGJ6 251 aa6.46□□□□□ -1.38
CDKN3-201ENST00000216414 ALDH16A1Q8IZ83 802 aa6.46□□□□□ -1.38
CDKN3-201ENST00000216414 LARGE2Q8N3Y3 721 aa6.46□□□□□ -1.38
CDKN3-201ENST00000216414 CHMP7Q8WUX9 453 aaPredicted RBP6.46□□□□□ -1.38
CDKN3-201ENST00000216414 NUDT8Q8WV74 236 aa6.46□□□□□ -1.38
CDKN3-201ENST00000216414 UCN2Q96RP3 112 aa6.46□□□□□ -1.38
CDKN3-201ENST00000216414 A0A0A0MRY4 1105 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 M0R2N6 131 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 PAX4O43316 350 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 TXKP42681 527 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 RAC1P63000 192 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 ADGRE1Q14246 886 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 POTEAQ6S8J7 498 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 BTLAQ7Z6A9 289 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 TXNRD3Q86VQ6 643 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 PNMA5Q96PV4 448 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 SLC6A14Q9UN76 642 aa6.45□□□□□ -1.38
CDKN3-201ENST00000216414 ATAD2Q6PL18 1390 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 COBLO75128 1261 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 ELNP15502 786 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 SELPP16109 830 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 MBTPS1Q14703 1052 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 HIF1AQ16665 826 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 SHISA2Q6UWI4 295 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 SIX5Q8N196 739 aa6.44□□□□□ -1.38
CDKN3-201ENST00000216414 C21orf2O43822 256 aa6.43□□□□□ -1.38
CDKN3-201ENST00000216414 MCTP1Q6DN14 999 aa6.43□□□□□ -1.38
CDKN3-201ENST00000216414 PSAPL1Q6NUJ1 521 aa6.43□□□□□ -1.38
CDKN3-201ENST00000216414 SCG3Q8WXD2 468 aaKnown RBP6.43□□□□□ -1.38
CDKN3-201ENST00000216414 DNAJB12Q9NXW2 375 aaKnown RBP6.43□□□□□ -1.38
CDKN3-201ENST00000216414 USP21Q9UK80 565 aa6.43□□□□□ -1.38
CDKN3-201ENST00000216414 YBX3P16989 372 aaKnown RBP eCLIP6.42□□□□□ -1.381e-6■■□□□ 14.5
CDKN3-201ENST00000216414 NFKB1P19838 968 aa6.42□□□□□ -1.38
CDKN3-201ENST00000216414 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
CDKN3-201ENST00000216414 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
CDKN3-201ENST00000216414 C2orf49Q9BVC5 232 aaPredicted RBP6.42□□□□□ -1.38
CDKN3-201ENST00000216414 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.42□□□□□ -1.38
CDKN3-201ENST00000216414 RGS9O75916 674 aaPredicted RBP6.41□□□□□ -1.38
CDKN3-201ENST00000216414 RASA1P20936 1047 aa6.41□□□□□ -1.38
CDKN3-201ENST00000216414 AFF1P51825 1210 aaKnown RBP6.41□□□□□ -1.38
CDKN3-201ENST00000216414 STAG2Q8N3U4 1231 aa6.41□□□□□ -1.38
CDKN3-201ENST00000216414 NAGPAQ9UK23 515 aa6.41□□□□□ -1.38
CDKN3-201ENST00000216414 LGR5O75473 907 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 DKK1O94907 266 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 SEC13P55735 322 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 FLIIQ13045 1269 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 CCINQ13939 588 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 FAM35AQ86V20 835 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 FMR1NBQ8N0W7 255 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-201ENST00000216414 GAS2L2Q8NHY3 880 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 HINFPQ9BQA5 517 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 GSX2Q9BZM3 304 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 EFCC1Q9HA90 598 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 RNF112Q9ULX5 631 aa6.4□□□□□ -1.38
CDKN3-201ENST00000216414 ARID1BQ8NFD5 2236 aaPredicted RBP6.4□□□□□ -1.39
CDKN3-201ENST00000216414 CPB1P15086 417 aa6.39□□□□□ -1.39
CDKN3-201ENST00000216414 RTN1Q16799 776 aa6.39□□□□□ -1.39
CDKN3-201ENST00000216414 COL17A1Q9UMD9 1497 aaPredicted RBP6.39□□□□□ -1.39
CDKN3-201ENST00000216414 TGFBR3LH3BV60 316 aa6.38□□□□□ -1.39
CDKN3-201ENST00000216414 EPB42P16452 691 aa6.38□□□□□ -1.39
CDKN3-201ENST00000216414 IER5Q5VY09 327 aa6.38□□□□□ -1.39
CDKN3-201ENST00000216414 KRT25Q7Z3Z0 450 aa6.38□□□□□ -1.39
CDKN3-201ENST00000216414 PCMTD2Q9NV79 361 aa6.38□□□□□ -1.39
CDKN3-201ENST00000216414 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
CDKN3-201ENST00000216414 LARP1Q6PKG0 1096 aaKnown RBP6.37□□□□□ -1.39
CDKN3-201ENST00000216414 TFIP11Q9UBB9 837 aaKnown RBP6.37□□□□□ -1.39
CDKN3-201ENST00000216414 BCS1LQ9Y276 419 aa6.37□□□□□ -1.39
CDKN3-201ENST00000216414 IDH3AP50213 366 aa6.36□□□□□ -1.39
CDKN3-201ENST00000216414 MLLT1Q03111 559 aaPredicted RBP6.36□□□□□ -1.39
CDKN3-201ENST00000216414 PCSK7Q16549 785 aa6.36□□□□□ -1.39
CDKN3-201ENST00000216414 KLK14Q9P0G3 267 aa6.36□□□□□ -1.39
CDKN3-201ENST00000216414 MAFBQ9Y5Q3 323 aaPredicted RBP6.36□□□□□ -1.39
CDKN3-201ENST00000216414 IREB2P48200 963 aaKnown RBP6.35□□□□□ -1.39
CDKN3-201ENST00000216414 ELMSAN1Q6PJG2 1045 aa6.35□□□□□ -1.39
CDKN3-201ENST00000216414 GLMNQ92990 594 aa6.35□□□□□ -1.39
CDKN3-201ENST00000216414 LPIN3Q9BQK8 851 aa6.35□□□□□ -1.39
CDKN3-201ENST00000216414 DMGDHQ9UI17 866 aaKnown RBP6.35□□□□□ -1.39
CDKN3-201ENST00000216414 IGFBP4P22692 258 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 TARSP26639 723 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms