RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 LARP1BQ659C4 914 aaKnown RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 UBE3BQ7Z3V4 1068 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 PROSER2Q86WR7 435 aaPredicted RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 LRRC2Q9BYS8 371 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 USP16Q9Y5T5 823 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 XRN1Q8IZH2 1706 aaKnown RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 CAMK4Q16566 473 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 TAOK2Q9UL54 1235 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 TPCN1Q9ULQ1 816 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 NAP1L2Q9ULW6 460 aaPredicted RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 CCDC129Q6ZRS4 1044 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 ZNF496Q96IT1 587 aaPredicted RBP9.91□□□□□ -0.82
CDC27-201ENST00000066544 PHF14O94880 888 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 DDX21Q9NR30 783 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDC27-201ENST00000066544 MTMR6Q9Y217 621 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 ZNF589Q86UQ0 364 aaPredicted RBP9.91□□□□□ -0.82
CDC27-201ENST00000066544 ERC1Q8IUD2 1116 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 CHMP4AQ9BY43 222 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 CCDC39Q9UFE4 941 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 SLFNL1Q499Z3 407 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 CCDC183Q5T5S1 534 aa9.91□□□□□ -0.82
CDC27-201ENST00000066544 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
CDC27-201ENST00000066544 BLOC1S2Q6QNY1 142 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 SEC62Q99442 399 aaKnown RBP9.9□□□□□ -0.82
CDC27-201ENST00000066544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDC27-201ENST00000066544 FGD1P98174 961 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 ST3GAL1Q11201 340 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 ZNF790Q6PG37 636 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 SLIT1O75093 1534 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 SPC24Q8NBT2 197 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 DDX11Q96FC9 970 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 ADCY5O95622 1261 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 CDC37L1Q7L3B6 337 aa9.9□□□□□ -0.82
CDC27-201ENST00000066544 SLC27A2O14975 620 aa9.9□□□□□ -0.83
CDC27-201ENST00000066544 UBE2HP62256 183 aa9.9□□□□□ -0.83
CDC27-201ENST00000066544 MTX1Q13505 466 aa9.9□□□□□ -0.83
CDC27-201ENST00000066544 DDX46Q7L014 1031 aaKnown RBP9.9□□□□□ -0.83
CDC27-201ENST00000066544 CEBPZQ03701 1054 aaKnown RBP9.89□□□□□ -0.83
CDC27-201ENST00000066544 NECTIN1Q15223 517 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 PXDNLA1KZ92 1463 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 CKAP2LQ8IYA6 745 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 NEUROD6Q96NK8 337 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 ATP6V1DQ9Y5K8 247 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 HSP90B1P14625 803 aaKnown RBP9.89□□□□□ -0.83
CDC27-201ENST00000066544 VPS53Q5VIR6 699 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 TTC5Q8N0Z6 440 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 PDIA6Q15084 440 aa9.89□□□□□ -0.83
CDC27-201ENST00000066544 LARP1Q6PKG0 1096 aaKnown RBP9.89□□□□□ -0.83
CDC27-201ENST00000066544 GOLGA6L4A6NEF3 574 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 TFCP2Q12800 502 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 UQCRHLA0A096LP55 91 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 NEURL1BA8MQ27 555 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 UQCRHP07919 91 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 TSC1Q92574 1164 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 GCKRQ14397 625 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 TTC6Q86TZ1 520 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 DBNDD2Q9BQY9 259 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 HDAC5Q9UQL6 1122 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 A0A087WZG4 1122 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 JAK2O60674 1132 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 TPM2P07951 284 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 TATP17735 454 aaPredicted RBP9.88□□□□□ -0.83
CDC27-201ENST00000066544 MAP4K1Q92918 833 aa9.88□□□□□ -0.83
CDC27-201ENST00000066544 CCDC85AQ96PX6 553 aaPredicted RBP9.88□□□□□ -0.83
CDC27-201ENST00000066544 DBNLQ9UJU6 430 aaKnown RBP9.87□□□□□ -0.83
CDC27-201ENST00000066544 FAM177BA6PVY3 158 aa9.87□□□□□ -0.83
CDC27-201ENST00000066544 HS1BP3Q53T59 392 aa9.87□□□□□ -0.83
CDC27-201ENST00000066544 LIG1P18858 919 aa9.87□□□□□ -0.83
CDC27-201ENST00000066544 ZSCAN31Q96LW9 406 aaPredicted RBP9.87□□□□□ -0.83
CDC27-201ENST00000066544 RGPD2P0DJD1 1756 aa9.87□□□□□ -0.83
CDC27-201ENST00000066544 RNF20Q5VTR2 975 aa9.87□□□□□ -0.83
CDC27-201ENST00000066544 SH2B1Q9NRF2 756 aaPredicted RBP9.87□□□□□ -0.83
CDC27-201ENST00000066544 LRRC37A3O60309 1634 aa9.87□□□□□ -0.83
CDC27-201ENST00000066544 KIAA2012Q0VF49 1180 aa9.87□□□□□ -0.83
CDC27-201ENST00000066544 ERBB3P21860 1342 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 ZNF500O60304 480 aaPredicted RBP9.86□□□□□ -0.83
CDC27-201ENST00000066544 NPHP3Q7Z494 1330 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 USP42Q9H9J4 1324 aaKnown RBP9.86□□□□□ -0.83
CDC27-201ENST00000066544 PSMA5P28066 241 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 LMBR1LQ6UX01 489 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 SLC52A2Q9HAB3 445 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 LTN1O94822 1766 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 CACNA1FO60840 1977 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 RRP9O43818 475 aaKnown RBP9.86□□□□□ -0.83
CDC27-201ENST00000066544 KRT85P78386 507 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 TIMM10P62072 90 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
CDC27-201ENST00000066544 EPB41L2O43491 1005 aaKnown RBP9.85□□□□□ -0.83
CDC27-201ENST00000066544 CHST3Q7LGC8 479 aa9.85□□□□□ -0.83
CDC27-201ENST00000066544 BICD2Q8TD16 824 aa9.85□□□□□ -0.83
CDC27-201ENST00000066544 TM6SF1Q9BZW5 370 aa9.85□□□□□ -0.83
CDC27-201ENST00000066544 IL17RAQ96F46 866 aa9.85□□□□□ -0.83
CDC27-201ENST00000066544 METTL22Q9BUU2 404 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms