RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 METTL22Q9BUU2 404 aaPredicted RBP15.81■□□□□ 0.12
CTNS-201ENST00000046640 CHGBP05060 677 aa15.81■□□□□ 0.12
CTNS-201ENST00000046640 MCM2P49736 904 aa15.81■□□□□ 0.12
CTNS-201ENST00000046640 COL9A3Q14050 684 aaPredicted RBP15.81■□□□□ 0.12
CTNS-201ENST00000046640 ERC1Q8IUD2 1116 aa15.81■□□□□ 0.12
CTNS-201ENST00000046640 FMNL2Q96PY5 1086 aa15.81■□□□□ 0.12
CTNS-201ENST00000046640 PHRF1Q9P1Y6 1649 aaKnown RBP15.8■□□□□ 0.12
CTNS-201ENST00000046640 A0A087WZG4 1122 aa15.8■□□□□ 0.12
CTNS-201ENST00000046640 CUL4AQ13619 759 aa15.8■□□□□ 0.12
CTNS-201ENST00000046640 TCEANC2Q96MN5 208 aa15.8■□□□□ 0.12
CTNS-201ENST00000046640 JAKMIP1Q96N16 626 aaKnown RBP15.8■□□□□ 0.12
CTNS-201ENST00000046640 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
CTNS-201ENST00000046640 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
CTNS-201ENST00000046640 TUBGCP6Q96RT7 1819 aa15.8■□□□□ 0.12
CTNS-201ENST00000046640 SPATA31A3Q5VYP0 1347 aa15.79■□□□□ 0.12
CTNS-201ENST00000046640 HDAC5Q9UQL6 1122 aa15.79■□□□□ 0.12
CTNS-201ENST00000046640 LARGE1O95461 756 aa15.79■□□□□ 0.12
CTNS-201ENST00000046640 A1BGP04217 495 aa15.79■□□□□ 0.12
CTNS-201ENST00000046640 BRINP3Q76B58 766 aa15.79■□□□□ 0.12
CTNS-201ENST00000046640 RUFY3Q7L099 469 aa15.79■□□□□ 0.12
CTNS-201ENST00000046640 EVI5LQ96CN4 794 aa15.78■□□□□ 0.12
CTNS-201ENST00000046640 BRD1O95696 1058 aa15.78■□□□□ 0.12
CTNS-201ENST00000046640 TFCP2Q12800 502 aa15.78■□□□□ 0.12
CTNS-201ENST00000046640 RUFY2Q8WXA3 655 aa15.78■□□□□ 0.12
CTNS-201ENST00000046640 N4BP2Q86UW6 1770 aaPredicted RBP15.77■□□□□ 0.12
CTNS-201ENST00000046640 A0A0D9SFI3 127 aa15.77■□□□□ 0.12
CTNS-201ENST00000046640 TTLL7Q6ZT98 887 aa15.77■□□□□ 0.12
CTNS-201ENST00000046640 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
CTNS-201ENST00000046640 ZBTB3Q9H5J0 574 aa15.77■□□□□ 0.12
CTNS-201ENST00000046640 GADD45BO75293 160 aaPredicted RBP15.77■□□□□ 0.12
CTNS-201ENST00000046640 FAM13BQ9NYF5 915 aa15.77■□□□□ 0.12
CTNS-201ENST00000046640 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
CTNS-201ENST00000046640 UTYO14607 1347 aa15.77■□□□□ 0.11
CTNS-201ENST00000046640 USP42Q9H9J4 1324 aaKnown RBP15.77■□□□□ 0.11
CTNS-201ENST00000046640 PTMAP06454 111 aaKnown RBP15.77■□□□□ 0.11
CTNS-201ENST00000046640 LRSAM1Q6UWE0 723 aa15.77■□□□□ 0.11
CTNS-201ENST00000046640 CCDC83Q8IWF9 413 aa15.77■□□□□ 0.11
CTNS-201ENST00000046640 DNAJC2Q99543 621 aaKnown RBP15.77■□□□□ 0.11
CTNS-201ENST00000046640 TAF6LQ9Y6J9 622 aa15.77■□□□□ 0.11
CTNS-201ENST00000046640 TNS3Q68CZ2 1445 aa15.76■□□□□ 0.11
CTNS-201ENST00000046640 NBPF26B4DH59 902 aa15.76■□□□□ 0.11
CTNS-201ENST00000046640 NBPF14Q5TI25 921 aa15.76■□□□□ 0.11
CTNS-201ENST00000046640 NBPF10Q6P3W6 841 aaKnown RBP15.76■□□□□ 0.11
CTNS-201ENST00000046640 NBPF15Q8N660 670 aa15.76■□□□□ 0.11
CTNS-201ENST00000046640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.76■□□□□ 0.11
CTNS-201ENST00000046640 RBM8AQ9Y5S9 174 aaKnown RBP15.76■□□□□ 0.11
CTNS-201ENST00000046640 LMBR1LQ6UX01 489 aa15.76■□□□□ 0.11
CTNS-201ENST00000046640 NECAB1Q8N987 351 aa15.76■□□□□ 0.11
CTNS-201ENST00000046640 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
CTNS-201ENST00000046640 TTC14Q96N46 770 aa15.76■□□□□ 0.11
CTNS-201ENST00000046640 OFD1O75665 1012 aa15.75■□□□□ 0.11
CTNS-201ENST00000046640 INTS4Q96HW7 963 aaKnown RBP15.75■□□□□ 0.11
CTNS-201ENST00000046640 PDRG1Q9NUG6 133 aa15.75■□□□□ 0.11
CTNS-201ENST00000046640 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.75■□□□□ 0.11
CTNS-201ENST00000046640 ALS2Q96Q42 1657 aa15.75■□□□□ 0.11
CTNS-201ENST00000046640 STRCP1A6NGW2 1772 aa15.75■□□□□ 0.11
CTNS-201ENST00000046640 PTPN12Q05209 780 aaKnown RBP15.75■□□□□ 0.11
CTNS-201ENST00000046640 CCDC85AQ96PX6 553 aaPredicted RBP15.75■□□□□ 0.11
CTNS-201ENST00000046640 DBNLQ9UJU6 430 aaKnown RBP15.75■□□□□ 0.11
CTNS-201ENST00000046640 LIMCH1Q9UPQ0 1083 aa15.75■□□□□ 0.11
CTNS-201ENST00000046640 C5P01031 1676 aa15.74■□□□□ 0.11
CTNS-201ENST00000046640 TPM2P07951 284 aa15.74■□□□□ 0.11
CTNS-201ENST00000046640 SLFNL1Q499Z3 407 aa15.74■□□□□ 0.11
CTNS-201ENST00000046640 ZNF589Q86UQ0 364 aaPredicted RBP15.74■□□□□ 0.11
CTNS-201ENST00000046640 NEUROD6Q96NK8 337 aa15.74■□□□□ 0.11
CTNS-201ENST00000046640 DBNDD2Q9BQY9 259 aa15.74■□□□□ 0.11
CTNS-201ENST00000046640 CCDC171Q6TFL3 1326 aa15.74■□□□□ 0.11
CTNS-201ENST00000046640 KIF1AQ12756 1690 aa15.74■□□□□ 0.11
CTNS-201ENST00000046640 EVA1CP58658 441 aa15.73■□□□□ 0.11
CTNS-201ENST00000046640 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
CTNS-201ENST00000046640 CREB3L3Q68CJ9 461 aa15.73■□□□□ 0.11
CTNS-201ENST00000046640 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
CTNS-201ENST00000046640 CCDC129Q6ZRS4 1044 aa15.73■□□□□ 0.11
CTNS-201ENST00000046640 ZNF830Q96NB3 372 aaPredicted RBP15.73■□□□□ 0.11
CTNS-201ENST00000046640 SEC62Q99442 399 aaKnown RBP15.73■□□□□ 0.11
CTNS-201ENST00000046640 ZNF594Q96JF6 807 aaPredicted RBP15.73■□□□□ 0.11
CTNS-201ENST00000046640 NOL7Q9UMY1 257 aaKnown RBP15.73■□□□□ 0.11
CTNS-201ENST00000046640 SMC3Q9UQE7 1217 aa15.73■□□□□ 0.11
CTNS-201ENST00000046640 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
CTNS-201ENST00000046640 ZKSCAN1P17029 563 aaPredicted RBP15.72■□□□□ 0.11
CTNS-201ENST00000046640 RFX5P48382 616 aaPredicted RBP15.72■□□□□ 0.11
CTNS-201ENST00000046640 NECTIN1Q15223 517 aa15.72■□□□□ 0.11
CTNS-201ENST00000046640 TNNI3KQ59H18 835 aa15.72■□□□□ 0.11
CTNS-201ENST00000046640 DDX46Q7L014 1031 aaKnown RBP15.72■□□□□ 0.11
CTNS-201ENST00000046640 SLAIN2Q9P270 581 aa15.72■□□□□ 0.11
CTNS-201ENST00000046640 FPGT-TNNI3KV9GXZ4 949 aa15.72■□□□□ 0.11
CTNS-201ENST00000046640 ZNF335Q9H4Z2 1342 aaPredicted RBP15.72■□□□□ 0.11
CTNS-201ENST00000046640 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
CTNS-201ENST00000046640 SYT1P21579 422 aa15.72■□□□□ 0.11
CTNS-201ENST00000046640 USP48Q86UV5 1035 aa15.72■□□□□ 0.11
CTNS-201ENST00000046640 CNPY2Q9Y2B0 182 aa15.72■□□□□ 0.11
CTNS-201ENST00000046640 TIMM10P62072 90 aa15.71■□□□□ 0.11
CTNS-201ENST00000046640 PLBD2Q8NHP8 589 aa15.71■□□□□ 0.11
CTNS-201ENST00000046640 STK3Q13188 491 aa15.71■□□□□ 0.11
CTNS-201ENST00000046640 CAMTA1Q9Y6Y1 1673 aa15.71■□□□□ 0.11
CTNS-201ENST00000046640 WDR33Q9C0J8 1336 aaKnown RBP15.7■□□□□ 0.1
CTNS-201ENST00000046640 SLC27A2O14975 620 aa15.7■□□□□ 0.1
CTNS-201ENST00000046640 ME3Q16798 604 aa15.7■□□□□ 0.1
CTNS-201ENST00000046640 PDLIM2Q96JY6 352 aa15.7■□□□□ 0.1
CTNS-201ENST00000046640 TSPY26PQ9H489 355 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms