RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Lrrfip2Q91WK0 415 aa14.32□□□□□ -0.12
Herc4-208ENSMUST00000219577 Asic4Q7TNS7 539 aa14.32□□□□□ -0.12
Herc4-208ENSMUST00000219577 Me3Q8BMF3 604 aa14.32□□□□□ -0.12
Herc4-208ENSMUST00000219577 Dis3l2Q8CI75 870 aaKnown RBP14.32□□□□□ -0.12
Herc4-208ENSMUST00000219577 Noc3lQ8VI84 807 aaKnown RBP14.32□□□□□ -0.12
Herc4-208ENSMUST00000219577 Nwd1A6H603 1563 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Esyt1Q3U7R1 1092 aaKnown RBP14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 R3hcc1Q8BSI6 488 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Rbm17Q8JZX4 405 aaKnown RBP14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Phkg2Q9DB30 406 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Stard3nlQ9DCI3 235 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Trim30aP15533 496 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Kiaa0754Q69ZZ9 979 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Wdr24Q8CFJ9 790 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 GptQ8QZR5 496 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 DbnlQ62418 436 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Med4Q9CQA5 270 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 DmtnQ9WV69 405 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Itsn1Q9Z0R4 1714 aa14.31□□□□□ -0.12
Herc4-208ENSMUST00000219577 Ddx54Q8K4L0 874 aaKnown RBP14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Cep57l1Q8VDS7 400 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Mrps25Q9D125 171 aaKnown RBP14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Usp32F8VPZ3 1604 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Dnajc2P54103 621 aaKnown RBP14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 VeztQ3ZK22 780 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Tmem67Q8BR76 992 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Kdm4aQ8BW72 1064 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 PhaxQ9JJT9 385 aaKnown RBP14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Wdr78E9PYY5 807 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Lnx1O70263 728 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Smg7Q5RJH6 1138 aaKnown RBP14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Hook1Q8BIL5 728 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Krt85Q9Z2T6 507 aa14.3□□□□□ -0.12
Herc4-208ENSMUST00000219577 Prl7a2O54831 253 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 NpeppsQ11011 920 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Larp6Q8BN59 492 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Ccdc158Q8CDI6 1109 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Kcnq3Q8K3F6 873 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Tomm22Q9CPQ3 142 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Myd88P22366 296 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Sgsm2Q80U12 1005 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Zscan22Q8BGS5 496 aa14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Prdm2A2A7B5 1709 aaKnown RBP14.29□□□□□ -0.12
Herc4-208ENSMUST00000219577 Msh6P54276 1358 aaKnown RBP14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Wdr93Q402B2 695 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Kank4Q6P9J5 1016 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 4930572O03RikQ8C5Y0 211 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Atg3Q9CPX6 314 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Usp25P57080 1055 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Ano1Q8BHY3 960 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Smc4Q8CG47 1286 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Bloc1s2Q9CWG9 143 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 BccipQ9CWI3 316 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Bin1O08539 588 aaKnown RBP14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Rab3gap1Q80UJ7 981 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Spef2Q8C9J3 1734 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 AceP09470 1312 aa14.28□□□□□ -0.12
Herc4-208ENSMUST00000219577 Flad1Q8R123 492 aa14.27□□□□□ -0.12
Herc4-208ENSMUST00000219577 Nphp3Q7TNH6 1325 aa14.27□□□□□ -0.12
Herc4-208ENSMUST00000219577 Ccdc173A0JLY1 547 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Tpm2P58774 284 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Ppp6r1Q7TSI3 856 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 PdcQ9QW08 244 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Abcc4E9Q236 1325 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Pnpla7A2AJ88 1352 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Stat1P42225 749 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Gnat3Q3V3I2 354 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Ano6Q6P9J9 911 aa14.27□□□□□ -0.13
Herc4-208ENSMUST00000219577 Eif3bQ8JZQ9 803 aaKnown RBP14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Cnpy2Q9QXT0 182 aa14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Rreb1Q3UH06 1700 aaKnown RBP14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Zfp51Q3U4L8 781 aa14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Atp1a3Q6PIC6 1013 aa14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Ccdc7Q9D541 371 aa14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 FanccP50652 591 aa14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Ano8Q6PB70 1060 aa14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Abcc10Q8R4P9 1501 aa14.26□□□□□ -0.13
Herc4-208ENSMUST00000219577 Mindy4Q3UQI9 744 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Rps6kb1Q8BSK8 525 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Rbm33Q9CXK9 1231 aaKnown RBP14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Bach2P97303 839 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Ncoa4Q5U4H9 625 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Rhot2Q8JZN7 620 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Mst1rQ62190 1378 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Hvcn1Q3U2S8 269 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 E4f1Q8CCE9 783 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Fam13bQ8K2H3 851 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 ApobrQ8VBT6 942 aa14.25□□□□□ -0.13
Herc4-208ENSMUST00000219577 Abl1P00520 1123 aa14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 Aox2Q5SGK3 1345 aa14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 Zkscan7E9PVW1 718 aa14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 Nfe2l3Q9WTM4 660 aa14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 HdgfP51859 237 aaKnown RBP14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 Tyro3P55144 880 aa14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 Ccdc129Q14B48 1034 aa14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 Igbp1bQ9QZ29 343 aa14.24□□□□□ -0.13
Herc4-208ENSMUST00000219577 CtcfQ61164 736 aaKnown RBP14.23□□□□□ -0.13
Herc4-208ENSMUST00000219577 AidaQ8C4Q6 305 aa14.23□□□□□ -0.13
Herc4-208ENSMUST00000219577 Pdia6Q922R8 440 aaKnown RBP14.23□□□□□ -0.13
Herc4-208ENSMUST00000219577 Ctdnep1Q3TP92 244 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms