RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Klc3Q91W40 508 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Taf5lQ91WQ5 589 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 GptQ8QZR5 496 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Prl3d3A0A0M6L0J6 224 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ankrd23Q812A3 306 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Psrc1Q9D0P7 329 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Pmfbp1Q9WVQ0 1022 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Igflr1Q3U4N7 345 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 LratQ9JI60 231 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Gli3Q61602 1583 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 EspnlQ3UYR4 1005 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Dhx38Q80X98 1228 aa11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Nsfl1cQ9CZ44 370 aaKnown RBP11.48□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ssh1Q76I79 1042 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Dlg5E9Q9R9 1921 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Arid4aF8VPQ2 1261 aaKnown RBP11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Strn4P58404 760 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Nlrp9bQ66X22 1003 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Cyp27a1Q9DBG1 533 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 DmtnQ9WV69 405 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Prl3d2F6R3P9 224 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Sult6b1P0CC03 303 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Cchcr1Q8K2I2 770 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Gigyf1Q99MR1 1044 aaKnown RBP11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Trim34aQ99PP6 485 aa11.47□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Trim34bJ3QNR8 485 aa11.46□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 EvcP57680 1005 aa11.46□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 4930504O13RikQ8C5Z9 145 aa11.46□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Gjb2Q00977 226 aa11.46□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Q9D9S1 216 aa11.46□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Rbbp8nlA2ABX0 614 aa11.46□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 EngaseQ8BX80 734 aa11.46□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Pes1Q9EQ61 584 aaKnown RBP11.46□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Mlh1Q9JK91 760 aa11.46□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Psma5Q9Z2U1 241 aaKnown RBP11.46□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ubap1lG3UW59 384 aa11.45□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Fam228bQ497Q6 232 aa11.45□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Adam1aQ60813 791 aa11.45□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Bicdl1A0JNT9 577 aa11.45□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Dis3l2Q8CI75 870 aaKnown RBP11.45□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ehd4Q9EQP2 541 aa11.45□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Rad50P70388 1312 aa11.45□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Eya2O08575 532 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Slf2Q6P9P0 1278 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 AK157302I3ITR1 129 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Nlrp1aQ2LKU9 1182 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 AbraQ8BUZ1 375 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Isca1Q9D924 129 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Mctp2Q5RJH2 878 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Slx4ipQ9D7Y9 413 aa11.44□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Crb1Q8VHS2 1405 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ifit2Q64112 472 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Emilin2Q8K482 1074 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ccdc129Q14B48 1034 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ddx46Q569Z5 1032 aaKnown RBP11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Tmem266Q8BZB3 538 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 BbxQ8VBW5 907 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Erc1Q99MI1 1120 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Smc3Q9CW03 1217 aaKnown RBP11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 NgdnQ9DB96 315 aaKnown RBP11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ltb4r2Q9JJL9 360 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Mdm2P23804 489 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Timm10P62073 90 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Cyp7a1Q64505 503 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Pdzrn3Q69ZS0 1063 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 PogkQ80TC5 607 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Golim4Q8BXA1 655 aa11.43□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Rbm8a2A0A0N4SUH6 174 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Cops6O88545 324 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Miga2Q8BK03 593 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Krt25Q8VCW2 446 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Rbm8aQ9CWZ3 174 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Bcl2l12Q9D3J3 255 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Mapk8ip1Q9WVI9 707 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Vps54Q5SPW0 977 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 DbnlQ62418 436 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Iffo2Q8R2V2 512 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Prr29B1ARI9 187 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Znf526Q8BI66 675 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Zbtb1Q91VL9 713 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Kdm3aQ6PCM1 1323 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ifit1bl2Q3U687 466 aa11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ltv1Q6NSQ7 470 aaKnown RBP11.42□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Kiaa0232Q80U59 1396 aaKnown RBP11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 NfkbibQ60778 359 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ddx19aQ61655 478 aaKnown RBP11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Eno4Q8C042 619 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Ak2Q9WTP6 239 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Shank2Q80Z38 1476 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Abca15E9PWH4 1668 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Esco1Q69Z69 843 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Pof1bQ8K4L4 587 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Polr3dQ91WD1 398 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Tbc1d4Q8BYJ6 1307 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Tmc2Q8R4P4 888 aa11.41□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Chrna2Q91X60 512 aa11.4□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Utp18Q5SSI6 552 aaKnown RBP11.4□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Bag4Q8CI61 457 aa11.4□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 Atf7Q8R0S1 413 aa11.4□□□□□ -0.58
Sh3rf1-202ENSMUST00000209611 BcorQ8CGN4 1759 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms