RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Ppp1r21Q3TDD9 780 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ano8Q6PB70 1060 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Tns3Q5SSZ5 1440 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Polr3dQ91WD1 398 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Lrrc43Q3V0L5 667 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Egfem1Q8C088 590 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ttc14Q9CSP9 761 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Chd1P40201 1711 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Pdia3P27773 505 aaKnown RBP16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 EvcP57680 1005 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Necab1Q8BG18 352 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 AU019823E9PUQ3 292 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Phldb2Q8K1N2 1249 aa16.13■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Mrps27Q8BK72 415 aaKnown RBP16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Slc14a2Q8R4T9 930 aa16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Kif24Q6NWW5 1356 aa16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ahdc1Q6PAL7 1594 aaKnown RBP16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Mmp8O70138 465 aa16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Robo2Q7TPD3 1470 aa16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Eif4a1P60843 406 aaKnown RBP16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Limch1Q3UH68 1057 aa16.12■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Arglu1Q3UL36 271 aaKnown RBP16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 ZwintQ9CQU5 252 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Lmbr1Q9JIT0 490 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Gm10093D3YYI8 482 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Hdac1O09106 482 aaKnown RBP16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ccdc43Q9CR29 222 aaKnown RBP16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Erbb3Q61526 1339 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ncapd2Q8K2Z4 1392 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Gm7347D3YYI9 267 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Speer4aF8VPX6 267 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Trap1aP19473 224 aa16.11■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Nap1l2P51860 460 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Prpf4bQ61136 1007 aaKnown RBP16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Zbtb3Q91X45 518 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ttc41Q692V3 1318 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Mctp1E9PV86 951 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ccdc102aQ3TMW1 549 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Cep112Q5PR68 954 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Arhgef1Q61210 920 aaKnown RBP16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Gps2Q921N8 327 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Pa2g4P50580 394 aaKnown RBP16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Nucb1Q02819 459 aaKnown RBP16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Bag1Q60739 355 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Dydc2Q9D3X8 139 aa16.1■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Map9Q3TRR0 646 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Ddx46Q569Z5 1032 aaKnown RBP16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Tmem143Q8VD26 458 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Lrrc59Q922Q8 307 aaKnown RBP16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 St5Q924W7 1134 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Asic4Q7TNS7 539 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Nucb2P81117 420 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Dctn1O08788 1281 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Tm6sf1P58749 370 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Gm12185Q5NCB2 835 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Tbc1d7Q9D0K0 293 aa16.09■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Snap23O09044 210 aa16.08■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Pip4k2aO70172 405 aa16.08■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Rai14Q9EP71 979 aaKnown RBP16.08■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Trim55G3X8Y1 545 aa16.08■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Aifm3Q3TY86 605 aa16.08■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Q4VA45 678 aa16.08■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 PtpruB1AUH1 1446 aa16.08■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ccdc83Q9D4V3 305 aa16.08■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 KdrP35918 1367 aa16.08■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Prl3d3A0A0M6L0J6 224 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Slc39a6Q8C145 765 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Nup133Q8R0G9 1155 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ccdc39Q9D5Y1 937 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Slu7Q8BHJ9 585 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Rad50P70388 1312 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Igsf1Q7TQA1 1317 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Tshz3Q8CGV9 1081 aa16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Foxp4Q9DBY0 795 aaKnown RBP16.07■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Slc35g1Q8BY79 368 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 RtcbQ99LF4 505 aaKnown RBP16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 IkQ9Z1M8 557 aaKnown RBP16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Rbm8a2A0A0N4SUH6 174 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 NefhP19246 1090 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Chl1P70232 1209 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Traf3ip1Q149C2 625 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 HellsQ60848 821 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ccdc158Q8CDI6 1109 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 NsmfQ99NF2 532 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Rbm8aQ9CWZ3 174 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 MicalclQ9D5U9 680 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Zcchc11B2RX14 1644 aaKnown RBP16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Hecw2Q6I6G8 1578 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Esco1Q69Z69 843 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 CenpqQ9CPQ5 267 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ddx17Q501J6 650 aaKnown RBP16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Samm50Q8BGH2 469 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ercc6lQ8BHK9 1240 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ift57Q8BXG3 429 aa16.06■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Igflr1Q3U4N7 345 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Sik1Q60670 779 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Paxbp1P58501 919 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Cpa2Q504N0 417 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Znf771Q8BJ90 317 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 RarsQ9D0I9 660 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms