RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Sh3bp5Q9Z131 463 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Bcl9lQ67FY2 1494 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Rbbp8nlA2ABX0 614 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Zkscan1Q8BGS3 561 aaKnown RBP11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Fam84aQ9D650 292 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Erbb4Q61527 1308 aa11.83□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Anxa1P10107 346 aaKnown RBP11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Hspa1lP16627 641 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Gjb2Q00977 226 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Pde4dQ01063 747 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Pm20d1Q8C165 503 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 LlphQ9D945 130 aaKnown RBP11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 AK157302I3ITR1 129 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Pof1bQ8K4L4 587 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Gigyf1Q99MR1 1044 aaKnown RBP11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Isca1Q9D924 129 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Gdpd2Q9ESM6 539 aa11.83□□□□□ -0.52
Rnf41-202ENSMUST00000171342 PogkQ80TC5 607 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Slfnl1Q8BHW9 410 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 KinQ8K339 391 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Smarce1O54941 411 aaKnown RBP11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Golim4Q8BXA1 655 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Tceanc2Q8R2M0 207 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Mylk2Q8VCR8 613 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Cpa2Q504N0 417 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ifit2Q64112 472 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Pdzrn3Q69ZS0 1063 aa11.82□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Crb1Q8VHS2 1405 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Slf2Q6P9P0 1278 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ints3Q7TPD0 1041 aaKnown RBP11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Rhot2Q8JZN7 620 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ncoa5Q91W39 579 aaKnown RBP11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Rad50P70388 1312 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Rbm8a2A0A0N4SUH6 174 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Atp6v1dP57746 247 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 VeztQ3ZK22 780 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Cyp7a1Q64505 503 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Bloc1s4Q8VED2 215 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Rbm8aQ9CWZ3 174 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Antxr1Q9CZ52 562 aa11.81□□□□□ -0.52
Rnf41-202ENSMUST00000171342 St18Q80TY4 1045 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Rab3gap1Q80UJ7 981 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Zfp142G5E869 1843 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Kiaa0232Q80U59 1396 aaKnown RBP11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Eya2O08575 532 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Anapc15P60007 132 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Gsdma2Q32M21 443 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Sgsm1Q8BPQ7 1093 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Prl3d2F6R3P9 224 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Cops6O88545 324 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Polr3dQ91WD1 398 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Q9D9S1 216 aa11.8□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Rasa1E9PYG6 1038 aa11.79□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ppp4r3aQ6P2K6 820 aa11.79□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Trim34aQ99PP6 485 aa11.79□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Dctn1O08788 1281 aa11.79□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ak2Q9WTP6 239 aa11.79□□□□□ -0.52
Rnf41-202ENSMUST00000171342 BccipQ9CWI3 316 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Cers3Q1A3B0 383 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 NgdnQ9DB96 315 aaKnown RBP11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ifit1bl2Q3U687 466 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Clca2Q8BG22 942 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Bag4Q8CI61 457 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Tmc2Q8R4P4 888 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Pus3Q9JI38 481 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 PhaxQ9JJT9 385 aaKnown RBP11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Mst1rQ62190 1378 aa11.78□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Trim34bJ3QNR8 485 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ms4a2P20490 235 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Cyp19a1P28649 503 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Rnf20Q5DTM8 973 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 NfkbibQ60778 359 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Atg9aQ68FE2 551 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Cdca7lQ922M5 438 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Ehd4Q9EQP2 541 aa11.77□□□□□ -0.52
Rnf41-202ENSMUST00000171342 Prr5lA2AVJ5 370 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Mcm4P49717 862 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Nlrp1aQ2LKU9 1182 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Esco1Q69Z69 843 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Lmbrd2Q8C561 694 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Abca15E9PWH4 1668 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Vwa3bJ9JI28 736 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ercc3P49135 783 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Zkscan8Q8BSL0 588 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Krt25Q8VCW2 446 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Mapk8ip1Q9WVI9 707 aa11.77□□□□□ -0.53
Rnf41-202ENSMUST00000171342 NpeppsQ11011 920 aa11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Utp18Q5SSI6 552 aaKnown RBP11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Tti2Q8BGV4 512 aa11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ccdc9Q8VC31 543 aaKnown RBP11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ugt1a5B2RT14 529 aa11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Babam1Q3UI43 333 aa11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Usp48Q3V0C5 1052 aa11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Smc3Q9CW03 1217 aaKnown RBP11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Pes1Q9EQ61 584 aaKnown RBP11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Col4a1P02463 1669 aa11.76□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Gpr182P43142 395 aa11.75□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ftl2P49945 183 aa11.75□□□□□ -0.53
Rnf41-202ENSMUST00000171342 AbraQ8BUZ1 375 aa11.75□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Tnks1bp1P58871 1720 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms