RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Jade3Q6IE82 823 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rrs1Q9CYH6 365 aaKnown RBP10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Gm21663A0A0G2JE01 267 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tldc2A2ACG1 198 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rabgap1A2AWA9 1064 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 5031410I06RikE9Q4E0 267 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Gm5862K7N5V5 267 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Gm10220K7N660 267 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Btbd11Q6GQW0 1109 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ctdp1Q7TSG2 960 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 CenppQ9CZ92 286 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Drc1Q3USS3 753 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 EappQ5BU09 281 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 WaplQ65Z40 1200 aaKnown RBP10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Epb41l3Q9WV92 929 aa10.61□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Snx25Q3ZT31 840 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rassf4Q8CB96 322 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rsph3bQ9DA80 389 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Igbp1bQ9QZ29 343 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Trim68Q8K243 485 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Wdhd1P59328 1117 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tmem266Q8BZB3 538 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Iws1Q8C1D8 766 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Zfp213E9QAW0 468 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Chmp6P0C0A3 200 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cct2P80314 535 aaKnown RBP10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ddx49Q4FZF3 480 aaKnown RBP10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Fam114a2Q8VE88 497 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 IqcdQ9D3V1 458 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 LrgukQ9D5S7 820 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 VimP20152 466 aaKnown RBP10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 LyarQ08288 388 aaKnown RBP10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Cep57Q8CEE0 500 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Stim2P83093 746 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccnb3Q810T2 1396 aa10.6□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Hoxa7P02830 229 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tnnc1P19123 161 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tspyl2Q7TQI8 677 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Mtmr7Q9Z2C9 660 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Hook2Q7TMK6 716 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Nlrp3Q8R4B8 1033 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Mx2Q9WVP9 655 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Sem1P60897 70 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ttc12Q8BW49 704 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Mis12Q9CY25 206 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tuft1O08970 390 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Traf3ip1Q149C2 625 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Mum1l1Q4VA55 681 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Dennd6aQ8BH65 605 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Setdb1O88974 1307 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc152E9PX14 254 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Serpinc1P32261 465 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Tubb4bP68372 445 aaKnown RBP10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Gjb2Q00977 226 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Krt23Q99PS0 422 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ddx19aQ61655 478 aaKnown RBP10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc66Q6NS45 935 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Ccdc14Q8K2J4 934 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Sec63Q8VHE0 760 aaKnown RBP10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Sart1Q9Z315 806 aaKnown RBP10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 Rab3gap2Q8BMG7 1366 aa10.59□□□□□ -0.71
Col6a5-201ENSMUST00000165165 B4galnt4Q766D5 1034 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Basp1Q91XV3 226 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Tsnaxip1Q99P25 704 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Cyp4f39Q8BGU0 532 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Pde6cQ91ZQ1 861 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ttc5Q99LG4 440 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Hs6st3Q9QYK4 470 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 WrnO09053 1401 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 GmnnO88513 206 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ints8Q80V86 995 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Cep85Q8BMK0 761 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 HscbQ8K3A0 234 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Haus2Q9CQS9 234 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Bloc1s2Q9CWG9 143 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ebag9Q9D0V7 213 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 NpcdF8VQB8 469 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ampd3O08739 766 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Bicdl2Q8CHW5 507 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ppp1r14cQ8R4S0 164 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Mmel1Q9JLI3 765 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Mcm10Q0VBD2 885 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Myo6Q64331 1265 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Zbtb41Q811F1 908 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Hs2st1Q8R3H7 356 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Usp5P56399 858 aaKnown RBP10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ube2hP62257 183 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Smarcc2Q6PDG5 1213 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Actn2Q9JI91 894 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Tbc1d7Q9D0K0 293 aa10.58□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Arid3aQ62431 601 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Rbm33Q9CXK9 1231 aaKnown RBP10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Fam186bD3Z420 943 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Akr1b8P45377 316 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ccdc92Q8VDN4 314 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Tekt2Q922G7 430 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Gm21698A0A087WQP8 267 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ankrd35E9Q9D8 996 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ift88Q61371 824 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ano10Q8BH79 659 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 64.4 ms