RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Ppp1r9aH3BJD6 1292 aa16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Ddb1Q3U1J4 1140 aaKnown RBP16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 ScaperF8VQ70 1398 aaKnown RBP16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Rbbp8nlA2ABX0 614 aa16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Ccdc85cE9Q6B2 420 aa16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Sde2Q8K1J5 448 aaKnown RBP16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Tiam1Q60610 1591 aa16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Pdia4P08003 638 aaKnown RBP16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Igf1rQ60751 1373 aa16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Bloc1s2Q9CWG9 143 aa16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Rasa1E9PYG6 1038 aa16.65■□□□□ 0.26
Shroom3-202ENSMUST00000113054 Fam184aE9PW83 1143 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Atp2b3Q0VF55 1220 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ufl1Q8CCJ3 793 aaKnown RBP16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Tbc1d8Q9Z1A9 1134 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 1700018F24RikB2RW27 314 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Smarcc2Q6PDG5 1213 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Sbno1Q689Z5 1390 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Maats1Q8BRC6 783 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Zbtb43Q9DAI4 467 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ampd3O08739 766 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Skor1Q8BX46 964 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Krt25Q8VCW2 446 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Dydc2Q9D3X8 139 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Atf7Q8R0S1 413 aa16.64■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Jakmip3Q5DTN8 844 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 HellsQ60848 821 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ift122Q6NWV3 1182 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ktn1Q61595 1327 aaKnown RBP16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Hmgb2P30681 210 aaKnown RBP16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Hdhd2Q3UGR5 259 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ppm1eQ80TL0 749 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 RalylQ8BTF8 293 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 PicalmQ7M6Y3 660 aaKnown RBP16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Smc1aQ9CU62 1233 aaKnown RBP16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Kiaa1524Q8BWY9 907 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Dnaaf4Q8R368 420 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Calml4Q91WQ9 153 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Stat1P42225 749 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Nf2P46662 596 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 ParnQ8VDG3 624 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Rcan3Q9JKK0 239 aa16.63■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ccdc191J3QQ27 883 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Dnajc10Q9DC23 793 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Xrcc4Q924T3 326 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Echdc1Q9D9V3 322 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Pkd2l2Q9JLG4 621 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Skida1Q80YR3 822 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Emilin2Q8K482 1074 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Gm42641I6L9G2 585 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Stx1aO35526 288 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 AtripQ8BMG1 785 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Camsap2Q8C1B1 1461 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Fam107bQ3TGF2 131 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 WaplQ65Z40 1200 aaKnown RBP16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 GckrQ91X44 587 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Tmco5aQ9D9D5 303 aa16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Mybbp1aQ7TPV4 1344 aaKnown RBP16.62■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Dennd3A2RT67 1274 aa16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Kif22Q3V300 660 aa16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Krt23Q99PS0 422 aa16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Mrpl12Q9DB15 201 aaKnown RBP16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Zbtb45Q52KG4 520 aa16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Caskin1Q6P9K8 1431 aa16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Hspa4Q61316 841 aa16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ddx19aQ61655 478 aaKnown RBP16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Gm21985Q6P6P5 1106 aa16.61■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Pus7B7ZNL8 666 aaKnown RBP16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Adcy5P84309 1262 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Asxl2Q8BZ32 1370 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Tbc1d8bA3KGB4 1114 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Prkg1P0C605 671 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Iffo1Q8BXL9 562 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ctage5Q8R311 779 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Gm44503E9PYU5 387 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 4921504E06RikQ8CET2 560 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 FanclQ9CR14 375 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Amotl1Q9D4H4 968 aa16.6■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Haus2Q9CQS9 234 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Wwc1Q5SXA9 1104 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Krt15Q61414 452 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Kif5bQ61768 963 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ccdc93Q7TQK5 629 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Tmem266Q8BZB3 538 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 RtcbQ99LF4 505 aaKnown RBP16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Naip7Q9JIB3 1402 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Naip6Q9JIB6 1403 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Lonrf3Q9D4H7 753 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Nlrp2Q4PLS0 1046 aaKnown RBP16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Abcf1Q6P542 837 aaKnown RBP16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Tekt3Q6X6Z7 490 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Cdca8Q8BHX3 289 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 CpvlQ9D3S9 478 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Taf7Q9R1C0 341 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Usp33Q8R5K2 909 aa16.59■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Ppfia1B2RXQ2 1266 aa16.58■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Eid1Q9DCR4 169 aa16.58■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Mroh7A2AVR2 1279 aa16.58■□□□□ 0.25
Shroom3-202ENSMUST00000113054 Eif6O55135 245 aa16.58■□□□□ 0.24
Shroom3-202ENSMUST00000113054 DesP31001 469 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms