RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Olr1Q9EQ09 363 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Hmgb2P30681 210 aaKnown RBP12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ift74Q8BKE9 600 aa12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Rbm8a2A0A0N4SUH6 174 aa12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Stx1aO35526 288 aa12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 U2af1l4Q8BGJ9 220 aa12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Rbm8aQ9CWZ3 174 aa12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Dnm1P39053 867 aa12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Prrc2bQ7TPM1 1486 aaKnown RBP12.77□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Jade2Q6ZQF7 829 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Letm1Q9Z2I0 738 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Adcy5P84309 1262 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ppp1r9bQ6R891 817 aaKnown RBP12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ddx10Q80Y44 875 aaKnown RBP12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Zbtb43Q9DAI4 467 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 WtapQ9ER69 396 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Pknox2Q8BG99 474 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Egfem1Q8C088 590 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Dydc1Q9D9T0 175 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 F2rP30558 430 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Tbc1d2bQ3U0J8 965 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 MthfsQ9D110 203 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Fmn2Q9JL04 1578 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ncf1Q09014 390 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Cnga2Q62398 664 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 TxlnbQ8VBT1 685 aa12.76□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Atp8b2P98199 1209 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ube2hP62257 183 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Map9Q3TRR0 646 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Glg1Q61543 1175 aaKnown RBP12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Tmem143Q8VD26 458 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 SrrtQ99MR6 875 aaKnown RBP12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ampd3O08739 766 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Pdia4P08003 638 aaKnown RBP12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Casp1P29452 402 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Atp2b3Q0VF55 1220 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ttc12Q8BW49 704 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Myl6bQ8CI43 207 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Tut1Q8R3F9 869 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Lman1Q9D0F3 517 aa12.75□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Atp2b1G5E829 1220 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Hvcn1Q3U2S8 269 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Dapk3O54784 448 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 IntuQ059U7 942 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Def6Q8C2K1 630 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Plekhg2Q6KAU7 1340 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Uri1Q3TLD5 531 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Pde1cQ64338 706 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Rnf216P58283 853 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ttc21aQ8C0S4 1314 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Smtnl1Q99LM3 459 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ktn1Q61595 1327 aaKnown RBP12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Dennd3A2RT67 1274 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Gas2l2Q5SSG4 860 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ano2Q8CFW1 1002 aa12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Bicc1Q99MQ1 977 aaKnown RBP12.74□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Mcmdc2E9Q956 681 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ercc3P49135 783 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Prim1P20664 417 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Abcf1Q6P542 837 aaKnown RBP12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Mtmr3Q8K296 1196 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 4931400O07RikQ9D4M5 137 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Lrriq1Q0P5X1 1673 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ccdc191J3QQ27 883 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Zbtb45Q52KG4 520 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Rnf187Q8BFX1 236 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Amotl1Q9D4H4 968 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Astn2Q80Z10 1352 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Pdia3P27773 505 aaKnown RBP12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ppm1eQ80TL0 749 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 DlatQ8BMF4 642 aa12.73□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Myl3P09542 204 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 SympkQ80X82 1284 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Krt23Q99PS0 422 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Tbc1d8bA3KGB4 1114 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Cavin1O54724 392 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Gjc1P28229 396 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ppp4r3aQ6P2K6 820 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ufl1Q8CCJ3 793 aaKnown RBP12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Klhl10Q9D5V2 608 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Fam213aQ9CYH2 218 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Baiap2l1Q9DBJ3 514 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Rrbp1Q99PL5 1605 aaKnown RBP12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 LlphQ9D945 130 aaKnown RBP12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Mybbp1aQ7TPV4 1344 aaKnown RBP12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Eya1P97767 591 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ddb1Q3U1J4 1140 aaKnown RBP12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ano8Q6PB70 1060 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Fam160b2Q80YR2 744 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Vamp4O70480 141 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Tspyl3Q3UYP3 334 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 TxlnaQ6PAM1 554 aaKnown RBP12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Hs2st1Q8R3H7 356 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Pik3ap1Q9EQ32 811 aa12.72□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ankrd40Q5SUE8 363 aa12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ctnnbl1Q9CWL8 563 aaKnown RBP12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Slx4ipQ9D7Y9 413 aa12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Hoxc9P09633 260 aa12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 ThemisQ8BGW0 636 aa12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Frat2Q8K025 231 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms