RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Fermt1P59113 677 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Sptbn5F6UCX4 1208 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Ppfibp2O35711 882 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Mybl2P48972 704 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Ddx10Q80Y44 875 aaKnown RBP13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 GancQ8BVW0 898 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Lrriq1Q0P5X1 1673 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Hoxc9P09633 260 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Ttc12Q8BW49 704 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Nup88Q8CEC0 753 aaKnown RBP13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Pla2r1Q62028 1487 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Fam170aQ66LM6 333 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Lmod1Q8BVA4 595 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Znf692Q3U381 531 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 ZwintQ9CQU5 252 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 ItpripQ3TNL8 555 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Fchsd1Q6PFY1 688 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 Kiaa1524Q8BWY9 907 aa13.15□□□□□ -0.3
Chd3-202ENSMUST00000108661 AW822073A0A0N4SUK1 652 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Tex19.1Q99MV2 351 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Chaf1aQ9QWF0 911 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Pprc1Q6NZN1 1644 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Grm8P47743 908 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 P4ha1Q60715 534 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Zbtb21E9Q444 1094 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Mpp4Q6P7F1 635 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Vmn1r199Q8R280 367 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Synj2Q9D2G5 1434 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Arhgef12Q8R4H2 1543 aaKnown RBP13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Dctn1O08788 1281 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Slc4a2P13808 1237 aaKnown RBP13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Ptch1Q61115 1434 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Zkscan1Q8BGS3 561 aaKnown RBP13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 AdnpQ9Z103 1108 aaKnown RBP13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 PaskQ8CEE6 1383 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cct2P80314 535 aaKnown RBP13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Ppp4r3aQ6P2K6 820 aa13.14□□□□□ -0.31
Chd3-202ENSMUST00000108661 Gm4758L7N258 96 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Brms1Q99N20 246 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Mctp1E9PV86 951 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Chmp6P0C0A3 200 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Card10P58660 1021 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Gm12185Q5NCB2 835 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Map3k12Q60700 888 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 WtapQ9ER69 396 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Dok7Q18PE0 504 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Xpo5Q924C1 1204 aaKnown RBP13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 EzrP26040 586 aaKnown RBP13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Ces5aQ6AW46 575 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Abtb2Q7TQI7 1024 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 A0A1W2P7S8 802 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cdc5lQ6A068 802 aaKnown RBP13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 CenphQ9QYM8 241 aa13.13□□□□□ -0.31
Chd3-202ENSMUST00000108661 Fhod3Q76LL6 1578 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cfap58B2RW38 873 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Calm1P0DP26 149 aaKnown RBP13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Calm2P0DP27 149 aaKnown RBP13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Calm3P0DP28 149 aaKnown RBP13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cops6O88545 324 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Mns1Q61884 491 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Ttc14Q9CSP9 761 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Metap2O08663 478 aaKnown RBP13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Smarcad1Q04692 1021 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Gas2l3Q3UWW6 683 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 CpvlQ9D3S9 478 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cwc15Q9JHS9 229 aaKnown RBP13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Neurog2P70447 263 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cep112Q5PR68 954 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Tfip11Q9ERA6 838 aaKnown RBP13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Bcar3Q9QZK2 820 aa13.12□□□□□ -0.31
Chd3-202ENSMUST00000108661 Pagr1bF6V0H0 108 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Arhgef18Q6P9R4 1021 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Pagr1aQ99L02 253 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 2310002L09RikQ9D7L5 217 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Kmt5bQ3U8K7 883 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Pls1Q3V0K9 630 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Q4VA45 678 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Pof1bQ8K4L4 587 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Gjb2Q00977 226 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Pram1Q6BCL1 675 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Exoc8Q6PGF7 716 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Znf394Q9Z1D9 521 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Smtnl1Q99LM3 459 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 Tbc1d8Q9Z1A9 1134 aa13.11□□□□□ -0.31
Chd3-202ENSMUST00000108661 RalgapbQ8BQZ4 1484 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Cnnm2Q3TWN3 875 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Q3UPC7 1272 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Prkab2Q6PAM0 271 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Znf131Q8K3J5 619 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Tmod4Q9JLH8 345 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 B4galnt4Q766D5 1034 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Skida1Q80YR3 822 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Tnpo1Q8BFY9 898 aaKnown RBP13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Aox4Q3TYQ9 1336 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Snapc4Q8BP86 1333 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Nsd3Q6P2L6 1439 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 GnaqP21279 359 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Bag1Q60739 355 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Yeats2Q3TUF7 1407 aa13.1□□□□□ -0.31
Chd3-202ENSMUST00000108661 Mx1P09922 631 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 81.7 ms