RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Prpf31Q8CCF0 499 aaKnown RBP11.9□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Spag5Q7TME2 1165 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ankrd49Q8VE42 238 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ssrp1Q08943 708 aaKnown RBP11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Myl6bQ8CI43 207 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Bst2Q8R2Q8 172 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Cabp5Q9JLK3 173 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Gm18336A0A140LIU8 765 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tnpo1Q8BFY9 898 aaKnown RBP11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Iffo1Q8BXL9 562 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 AW822073A0A0N4SUK1 652 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Gm4758L7N258 96 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Cep120Q7TSG1 988 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Drc3Q9D5E4 523 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Cnnm2Q3TWN3 875 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Gpr162Q3UN16 588 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Traf1P39428 409 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Limch1Q3UH68 1057 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Paip2Q9D6V8 124 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 WtapQ9ER69 396 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Fam184aE9PW83 1143 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Gjb2Q00977 226 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Efcab2Q9CQ46 164 aa11.89□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ano2Q8CFW1 1002 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Clip2Q9Z0H8 1047 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Asxl1P59598 1514 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Dennd3A2RT67 1274 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Idi2Q8BFZ6 227 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Usp33Q8R5K2 909 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Znf771Q8BJ90 317 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tmc2Q8R4P4 888 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tmem143Q8VD26 458 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Mtmr7Q9Z2C9 660 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Gjc1P28229 396 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Fam160b2Q80YR2 744 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Sil1Q9EPK6 465 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tbc1d8Q9Z1A9 1134 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tmem94Q7TSH8 1360 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 WaplQ65Z40 1200 aaKnown RBP11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Skor1Q8BX46 964 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Slc4a8Q8JZR6 1089 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Fam13bQ8K2H3 851 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Smco2Q9DA21 347 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Arhgef5E9Q7D5 1581 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Magi1Q6RHR9 1471 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Gbp8Q2V6D6 525 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Bbof1Q3V079 533 aa11.88□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Mybl2P48972 704 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Q7TT23 1179 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Il16O54824 1322 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ktn1Q61595 1327 aaKnown RBP11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 LyarQ08288 388 aaKnown RBP11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Sp4Q62445 782 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 MthfsQ9D110 203 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 2310002L09RikQ9D7L5 217 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Aldh1l1Q8R0Y6 902 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tfip11Q9ERA6 838 aaKnown RBP11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Rasal2E9PW37 1286 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Maats1Q8BRC6 783 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Pcdhb5Q91XZ5 792 aa11.87□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tldc2A2ACG1 198 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tbc1d8bA3KGB4 1114 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Atp2b1G5E829 1220 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Atp2b3Q0VF55 1220 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Bcl11aQ9QYE3 773 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ppp1r9aH3BJD6 1292 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 IntuQ059U7 942 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Abcf1Q6P542 837 aaKnown RBP11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Taf7lQ9D3R9 471 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Skor2A7M7C7 1008 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Cct2P80314 535 aaKnown RBP11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 BbxQ8VBW5 907 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Grin2bQ01097 1482 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Arhgef6Q8K4I3 771 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Krt20Q9D312 431 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Eid1Q9DCR4 169 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Rapgef6Q5NCJ1 1609 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Atp8b3Q6UQ17 1335 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Tut1Q8R3F9 869 aa11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ddx27Q921N6 760 aaKnown RBP11.86□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Slc4a4O88343 1079 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ces5aQ6AW46 575 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Frmd3Q8BHD4 595 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Plb1Q3TTY0 1478 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Zfp444Q3TDV8 331 aaKnown RBP11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Maco1Q7TQE6 664 aaKnown RBP11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ankrd1Q9CR42 319 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Zbtb43Q9DAI4 467 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Nolc1E9Q5C9 702 aaKnown RBP11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Prkar2bP31324 416 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Sestd1Q80UK0 696 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Mtus1Q5HZI1 1210 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ccdc42Q5SV66 316 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Ift57Q8BXG3 429 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Apol7aB2RT54 418 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Zbtb21E9Q444 1094 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Hmg20bQ9Z104 317 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Krt25Q8VCW2 446 aa11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Sec63Q8VHE0 760 aaKnown RBP11.85□□□□□ -0.51
Scn9a-201ENSMUST00000100063 Spa17Q62252 149 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 112.7 ms