RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Srgap3Q812A2 1099 aa10.93□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Pcdhb15Q91Y04 786 aa10.93□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 AceP09470 1312 aa10.93□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Mcmdc2E9Q956 681 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Ubxn10Q8BG34 277 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Disp3A3KFU9 1347 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Col16a1Q8BLX7 1580 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 VirmaA2AIV2 1811 aaKnown RBP10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Leo1Q5XJE5 667 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Golph3lQ8R088 285 aaKnown RBP10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Pcdh10E9PXQ7 1057 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Frmd3Q8BHD4 595 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Ccdc96Q9CR92 584 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Robo1O89026 1612 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Ms4a1P19437 291 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Gjb2Q00977 226 aa10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Esyt1Q3U7R1 1092 aaKnown RBP10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 U2surpQ6NV83 1029 aaKnown RBP10.92□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Frat1P70339 274 aa10.91□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Zkscan4Q5SZT6 480 aa10.91□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Rfc1P35601 1131 aa10.91□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 HnrnpuQ8VEK3 800 aaKnown RBP10.91□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Asxl2Q8BZ32 1370 aa10.91□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Nkx2-3P97334 362 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Stk36Q69ZM6 1316 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Sgsm2Q80U12 1005 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Noc3lQ8VI84 807 aaKnown RBP10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 1700113H08RikE9Q9Q5 327 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 XpcP51612 930 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 FntaQ61239 377 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Ccdc66Q6NS45 935 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 ZgpatQ8VDM1 511 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Bmp2kQ91Z96 1138 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Dusp10Q9ESS0 483 aa10.9□□□□□ -0.66
Ccdc171-201ENSMUST00000053414 Me3Q8BMF3 604 aa10.9□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Fsd2Q8BZ52 692 aa10.9□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Q9D9H8 365 aa10.9□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Igsf1Q7TQA1 1317 aa10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Hmgb2P30681 210 aaKnown RBP10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ggnbp2Q5SV77 696 aa10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Nol7Q9D7Z3 254 aaKnown RBP10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Cnpy2Q9QXT0 182 aa10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Nphp1Q9QY53 687 aa10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Mon2Q80TL7 1715 aa10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Kiaa0232Q80U59 1396 aaKnown RBP10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Odf2lQ9D478 642 aa10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Als2Q920R0 1651 aa10.89□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 D430041D05RikF6ZGR6 1678 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Usp28Q5I043 1051 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 TrhQ62361 256 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Zfp317Q8C0Q5 607 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Cabp4Q8VHC5 271 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Igbp1bQ9QZ29 343 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Dip2bQ3UH60 1574 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Mst1rQ62190 1378 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Tpd52l1O54818 204 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Kcnk13Q8R1P5 405 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Foxp4Q9DBY0 795 aaKnown RBP10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Cdkn1cP49919 348 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Nup88Q8CEC0 753 aaKnown RBP10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ugt1a5B2RT14 529 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Trim30aP15533 496 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Samsn1P57725 372 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Morc2aQ69ZX6 1030 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Lama4P97927 1816 aa10.88□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ccdc34Q3UI66 367 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Zbtb45Q52KG4 520 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Cep135Q6P5D4 1140 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 EcsitQ9QZH6 435 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Nphp3Q7TNH6 1325 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Akap11E9Q777 1895 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Gli3Q61602 1583 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Podxl2Q8CAE9 603 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Tmx1Q8VBT0 278 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 1700006A11RikB9EHI3 544 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 L1td1Q587J6 782 aaKnown RBP10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ifit2Q64112 472 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Emilin2Q8K482 1074 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Atp10bB1AWN4 1474 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Taf5lQ91WQ5 589 aa10.87□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Pcmtd1P59913 357 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Tmem87aQ8BXN9 555 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Plcd1Q8R3B1 756 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 RubcnlQ3TD16 648 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Kiaa0754Q69ZZ9 979 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Elf2Q9JHC9 593 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 CoblQ5NBX1 1337 aaKnown RBP10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Plin1Q8CGN5 517 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 KinQ8K339 391 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Tbc1d4Q8BYJ6 1307 aa10.86□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Birc3O08863 600 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Golgb1E9PVZ8 3238 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ier5O89113 308 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Gnai2P08752 355 aaKnown RBP10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Smarce1O54941 411 aaKnown RBP10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 FanccP50652 591 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ubash3aQ3V3E1 624 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ints3Q7TPD0 1041 aaKnown RBP10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Prkag3Q8BGM7 489 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Tceanc2Q8R2M0 207 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms