RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Cnnm2Q3TWN3 875 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 LlphQ9D945 130 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Haus2Q9CQS9 234 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Six6os1Q9CTN5 574 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Polr3aB2RXC6 1390 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 EvcP57680 1005 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Map3k9Q3U1V8 1077 aa18.91■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ccdc91Q9D8L5 442 aa18.9■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Metap2O08663 478 aaKnown RBP18.9■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Eif2aQ8BJW6 581 aaKnown RBP18.9■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ccdc152E9PX14 254 aa18.9■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Ggnbp2Q5SV77 696 aa18.9■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Mtus1Q5HZI1 1210 aa18.9■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Fgd6Q69ZL1 1399 aa18.9■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Zfp644E9QA22 1323 aa18.89■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Speer4dL7N216 212 aa18.89■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Tbc1d9Q3UYK3 1264 aa18.89■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Rsph10bE9PYQ0 876 aa18.89■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Slc38a10Q5I012 1090 aa18.89■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Arfgap2Q99K28 520 aa18.89■□□□□ 0.62
Ccdc88a-201ENSMUST00000040182 Usp25P57080 1055 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Epb41l3Q9WV92 929 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Prr29B1ARI9 187 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Specc1lQ2KN98 1118 aaKnown RBP18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Hook2Q7TMK6 716 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Znf653Q6YND2 615 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 PdiltQ9DAN1 588 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Naip2Q9QUK4 1447 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Rsrc1Q9DBU6 334 aa18.89■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Rad50P70388 1312 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Kmt5bQ3U8K7 883 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Ppp1r9bQ6R891 817 aaKnown RBP18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Vps18Q8R307 973 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Klf15Q9EPW2 415 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 ApobrQ8VBT6 942 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Tnnc1P19123 161 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Ppfibp1Q8C8U0 969 aaKnown RBP18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Dapk3O54784 448 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Polr3dQ91WD1 398 aa18.88■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Efhd1Q9D4J1 240 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Ccdc94Q9D6J3 314 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 GphnQ8BUV3 769 aaKnown RBP18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Tubb2aQ7TMM9 445 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Tubb2bQ9CWF2 445 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Rai14Q9EP71 979 aaKnown RBP18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Mkrn1Q9QXP6 481 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 A2mQ6GQT1 1474 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Neurog2P70447 263 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 AdnpQ9Z103 1108 aaKnown RBP18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Ccdc114Q3UX62 658 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Ift88Q61371 824 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Jmjd4Q8BFT6 427 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Mx2Q9WVP9 655 aa18.87■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Rfc1P35601 1131 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Tbc1d8bA3KGB4 1114 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Ssrp1Q08943 708 aaKnown RBP18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Rasa1E9PYG6 1038 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Kdm5aQ3UXZ9 1690 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Izumo3A6PWV3 263 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Evi5lH3BKQ3 813 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Egfl6Q9JJZ5 550 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Rprd2Q6NXI6 1469 aaKnown RBP18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Gnat3Q3V3I2 354 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Fam186bD3Z420 943 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Exoc1Q8R3S6 894 aa18.86■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Kank1E9Q238 1360 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Zscan29E9Q5B4 869 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 CadpsQ80TJ1 1355 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Mug1P28665 1476 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Bicdl1A0JNT9 577 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Cfap73J3QPZ5 306 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Matr3Q8K310 846 aaKnown RBP18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Fam114a1Q9D281 569 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Mxra7Q9CZH7 178 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Slc5a1Q8C3K6 665 aa18.85■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 FerP70451 823 aa18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 PogzQ8BZH4 1409 aaKnown RBP18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 4933428M09RikQ9D3X3 192 aa18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Pym1Q8CHP5 203 aaKnown RBP18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Hdac9Q99N13 588 aa18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Stat1P42225 749 aa18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Mrps27Q8BK72 415 aaKnown RBP18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Mrc2Q64449 1479 aa18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 GnaqP21279 359 aa18.84■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Plekhm2Q80TQ5 1018 aa18.83■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Arhgap24Q8C4V1 747 aa18.83■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Gm10378F6XQQ1 160 aa18.83■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Gucy1a3Q9ERL9 691 aa18.83■□□□□ 0.61
Ccdc88a-201ENSMUST00000040182 Syt1P46096 421 aa18.83■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 TnikP83510 1323 aa18.83■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Rnf216P58283 853 aa18.83■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Sdad1Q80UZ2 687 aaKnown RBP18.83■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Kif5bQ61768 963 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Arhgef6Q8K4I3 771 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Cib2Q9Z309 187 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Tacc3Q9JJ11 631 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 RalgapbQ8BQZ4 1484 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Serpinb6bO08804 377 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Irf9Q61179 399 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms