RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Aldh1l1Q8R0Y6 902 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Bicd2Q921C5 820 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Rreb1Q3UH06 1700 aaKnown RBP12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Gabpb2P81069 414 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Slc10a4Q3UEZ8 437 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Rnf41Q8BH75 317 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Cdcp1Q5U462 833 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Mrvi1Q9WUX5 899 aaKnown RBP12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Mapkapk5O54992 473 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Tmem67Q8BR76 992 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Zmym4A2A791 1549 aaKnown RBP12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 AW822073A0A0N4SUK1 652 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Mctp2Q5RJH2 878 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Cfap70D3YVL2 1141 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Rps6ka4Q9Z2B9 773 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Homer1Q9Z2Y3 366 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 TnrQ8BYI9 1358 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Snap23O09044 210 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Fam13aQ8BGI4 693 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Afg3l2Q8JZQ2 802 aaKnown RBP12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Erich4Q3UNU4 136 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Spon1Q8VCC9 807 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Peg3Q3URU2 1571 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Rad17Q6NXW6 688 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Fam160b2Q80YR2 744 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 Kiaa1551Q5DTW7 1521 aa12.48□□□□□ -0.41
Limch1-201ENSMUST00000038188 1700029H14RikE9PY36 240 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Prm3Q62100 101 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 AdpgkQ8VDL4 496 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Kif2cQ922S8 721 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Znf335A2A5K6 1337 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Aox4Q3TYQ9 1336 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Adgrb3Q80ZF8 1522 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Tmem2Q5FWI3 1383 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Traf3ip1Q149C2 625 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Stk11ipQ3TAA7 1072 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Rnf180Q3U827 592 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Pls1Q3V0K9 630 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Stxbp4Q9WV89 557 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Abtb2Q7TQI7 1024 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Nol12Q8BG17 217 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Q9D9S1 216 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 CltcQ68FD5 1675 aaKnown RBP12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 DlatQ8BMF4 642 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Mybl2P48972 704 aa12.47□□□□□ -0.41
Limch1-201ENSMUST00000038188 Irgm2A0A140LIF8 407 aa12.46□□□□□ -0.41
Limch1-201ENSMUST00000038188 Ccdc85aQ5SP85 500 aa12.46□□□□□ -0.41
Limch1-201ENSMUST00000038188 Jakmip1Q8BVL9 626 aa12.46□□□□□ -0.41
Limch1-201ENSMUST00000038188 Cfap52Q5F201 620 aa12.46□□□□□ -0.41
Limch1-201ENSMUST00000038188 Top1mtQ8R4U6 593 aa12.46□□□□□ -0.41
Limch1-201ENSMUST00000038188 Gcc1Q9D4H2 778 aa12.46□□□□□ -0.41
Limch1-201ENSMUST00000038188 Vps33bP59016 617 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Rps8P62242 208 aaKnown RBP12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Q3UJP5 209 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Ints3Q7TPD0 1041 aaKnown RBP12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Krt25Q8VCW2 446 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Uggt1Q6P5E4 1551 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Adgrl1Q80TR1 1466 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Zkscan8Q8BSL0 588 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 PaoxQ8C0L6 504 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Kdm8Q9CXT6 414 aa12.46□□□□□ -0.42
Limch1-201ENSMUST00000038188 Ttll7A4Q9F0 912 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 AU015836B2RUM3 263 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Sh3bgrQ9WUZ7 214 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 XpcP51612 930 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Polr3gQ6NXY9 223 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Bst2Q8R2Q8 172 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Adarb2Q9JI20 745 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Cyp26c1B2RXA7 518 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Hand2Q61039 217 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Exoc8Q6PGF7 716 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Tmem266Q8BZB3 538 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Sf3a1Q8K4Z5 791 aaKnown RBP12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Prdm2A2A7B5 1709 aaKnown RBP12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Ncapd2Q8K2Z4 1392 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Rfx1P48377 963 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Zbtb1Q91VL9 713 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Mtmr2Q9Z2D1 643 aa12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 Kif14L0N7N1 1674 aaKnown RBP12.45□□□□□ -0.42
Limch1-201ENSMUST00000038188 AampJ3QN89 436 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Nos1Q9Z0J4 1429 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Cdkl5Q3UTQ8 938 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Snx25Q3ZT31 840 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Hook1Q8BIL5 728 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Gpatch3Q8BIY1 525 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Cep55Q8BT07 462 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 4930407I10RikD3Z5T8 1512 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Snapc4Q8BP86 1333 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Pa2g4P50580 394 aaKnown RBP12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Kiaa0319lQ8K135 1048 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 CarsQ9ER72 831 aaKnown RBP12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Cacna2d4Q5RJF7 1116 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Atl3Q91YH5 541 aa12.44□□□□□ -0.42
Limch1-201ENSMUST00000038188 Q3UPC7 1272 aa12.43□□□□□ -0.42
Limch1-201ENSMUST00000038188 Pla2g4fQ50L41 855 aa12.43□□□□□ -0.42
Limch1-201ENSMUST00000038188 Ttc12Q8BW49 704 aa12.43□□□□□ -0.42
Limch1-201ENSMUST00000038188 FktnQ8R507 461 aa12.43□□□□□ -0.42
Limch1-201ENSMUST00000038188 Tecpr2Q3UH45 1423 aa12.43□□□□□ -0.42
Limch1-201ENSMUST00000038188 Klhl34A2AI76 644 aa12.43□□□□□ -0.42
Limch1-201ENSMUST00000038188 Nphp4P59240 1425 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms