RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gm10220K7N660 267 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Gnat3Q3V3I2 354 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Ints5Q8CHT3 1018 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Gripap1Q8VD04 806 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Trim44Q9QXA7 346 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Syde2E9PUP1 1314 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 AceP09470 1312 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Ugt1a5B2RT14 529 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Mdm2P23804 489 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Pkp1P97350 728 aaKnown RBP15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Bms1Q6PGF5 1284 aaKnown RBP15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 DpydQ8CHR6 1025 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Speer4bQ9D9F7 267 aa15.25■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Jarid2Q62315 1234 aa15.24■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Soga3Q6NZL0 945 aa15.24■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Abca3Q8R420 1704 aa15.24■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Fkbp5Q64378 456 aa15.24■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Tbc1d30Q69ZT9 766 aa15.24■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Mrpl50Q8VDT9 159 aaKnown RBP15.24■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Smc3Q9CW03 1217 aaKnown RBP15.24■□□□□ 0.03
Rnf4-201ENSMUST00000030992 PtmaP26350 111 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 F2rP30558 430 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Paxip1Q6NZQ4 1056 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Kdm4aQ8BW72 1064 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Dis3l2Q8CI75 870 aaKnown RBP15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Slx1bQ8BX32 270 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Cadps2Q8BYR5 1297 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 E4f1Q8CCE9 783 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Atf7Q8R0S1 413 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 StrbpQ91WM1 672 aaKnown RBP15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 PappaQ8R4K8 1624 aa15.23■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Eef2kO08796 724 aa15.22■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Zpr1Q62384 459 aa15.22■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Dhx38Q80X98 1228 aa15.22■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Nlrp1aQ2LKU9 1182 aa15.22■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Txnrd1Q9JMH6 613 aa15.22■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Sipa1l3G3X9J0 1776 aa15.22■□□□□ 0.03
Rnf4-201ENSMUST00000030992 AK157302I3ITR1 129 aa15.21■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Ppp4r3aQ6P2K6 820 aa15.21■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Polr3dQ91WD1 398 aa15.21■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Bmp2kQ91Z96 1138 aa15.21■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Gtf2a1Q99PM3 378 aa15.21■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Isca1Q9D924 129 aa15.21■□□□□ 0.03
Rnf4-201ENSMUST00000030992 Rbbp8nlA2ABX0 614 aa15.21■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Nol12Q8BG17 217 aa15.21■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Fbxl16A2RT62 479 aa15.2■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Psma5Q9Z2U1 241 aaKnown RBP15.2■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Atg9aQ68FE2 551 aa15.2■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Rps6kb1Q8BSK8 525 aa15.2■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Q8C5K5 320 aa15.2■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Hmg20bQ9Z104 317 aa15.2■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Prl3d3A0A0M6L0J6 224 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Rnf20Q5DTM8 973 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Ehd4Q9EQP2 541 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Sult6b1P0CC03 303 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 MecomP14404 1042 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Neurod6P48986 337 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Brinp3Q499E0 766 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 NfkbibQ60778 359 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Amer1Q7TS75 1132 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Fam102bQ8BQS4 339 aa15.19■□□□□ 0.02
Rnf4-201ENSMUST00000030992 ZyxQ62523 564 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Nek11Q8C0Q4 628 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Tmc2Q8R4P4 888 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 LratQ9JI60 231 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Ltb4r2Q9JJL9 360 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 PhaxQ9JJT9 385 aaKnown RBP15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Gm21680A0A0G2JGR8 267 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Ube2hP62257 183 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Aox1O54754 1333 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Rbm27Q5SFM8 1060 aaKnown RBP15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Vps54Q5SPW0 977 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 AbraQ8BUZ1 375 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 ZgpatQ8VDM1 511 aa15.18■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Tnrc6cQ3UHC0 1690 aaKnown RBP15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Zscan25B2RX31 543 aa15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Dhx16G3X8X0 1044 aaKnown RBP15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Zfp113Q8C689 439 aa15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Cwc25Q9DBF7 416 aa15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Cdhr2E9Q7P9 1308 aa15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 FanccP50652 591 aa15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Ccdc178Q8CDV0 866 aa15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Rcan3Q9JKK0 239 aa15.17■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Mb21d2Q8C525 428 aa15.16■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Fez1Q8K0X8 392 aa15.16■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Sos2Q02384 1333 aa15.16■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Prl3d2F6R3P9 224 aa15.16■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Ddrgk1Q80WW9 315 aa15.16■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Tceanc2Q8R2M0 207 aa15.16■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Zscan22Q8BGS5 496 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Stard3nlQ9DCI3 235 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Crb1Q8VHS2 1405 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 AppP12023 770 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 HdgfP51859 237 aaKnown RBP15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Usp44Q8C2S0 711 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Tsr2Q8C8T8 191 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Naa30Q8CES0 364 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 NaspQ99MD9 773 aaKnown RBP15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Med4Q9CQA5 270 aa15.15■□□□□ 0.02
Rnf4-201ENSMUST00000030992 Cd22P35329 862 aa15.14■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms