RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Vgll3P85442 326 aa10.21□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Rbm10Q99KG3 930 aaKnown RBP10.21□□□□□ -0.77
Ssr3-201ENSMUST00000029414 MypnQ5DTJ9 1315 aa10.21□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Thsd7bQ6P4U0 1607 aa10.21□□□□□ -0.78
Ssr3-201ENSMUST00000029414 AK157302I3ITR1 129 aa10.21□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Gtpbp6Q3U6U5 514 aa10.21□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Isca1Q9D924 129 aa10.21□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Ptf1aQ9QX98 324 aa10.21□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Kank1E9Q238 1360 aa10.21□□□□□ -0.78
Ssr3-201ENSMUST00000029414 XpcP51612 930 aa10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Bicc1Q99MQ1 977 aaKnown RBP10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Tspoap1Q7TNF8 1846 aa10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Flt1P35969 1333 aa10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Ttc41Q692V3 1318 aa10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 NpcdF8VQB8 469 aa10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 NudcO35685 332 aaKnown RBP10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Rbm17Q8JZX4 405 aaKnown RBP10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 NynrinQ5DTZ0 1840 aa10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Cyp2d11P24457 504 aa10.2□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Phrf1A6H619 1682 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Dok7Q18PE0 504 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Insm1Q63ZV0 521 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Echdc1Q9D9V3 322 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Foxo4Q9WVH3 505 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Setdb1O88974 1307 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Eva1cP58659 440 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Map3k9Q3U1V8 1077 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Fam83gQ5SWY7 812 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Psme4Q5SSW2 1843 aa10.19□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Vamp4O70480 141 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Psd3Q2PFD7 1037 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 WaslQ91YD9 501 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Stk32bQ9JJX8 414 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Myd88P22366 296 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Cyp19a1P28649 503 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Chl1P70232 1209 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Pcsk7Q61139 770 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Ddx58Q6Q899 926 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Ppm1mQ8BU27 406 aa10.18□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Ehd4Q9EQP2 541 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Gja10Q9WUS4 505 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Csf1rP09581 977 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Mex3cQ05A36 652 aaKnown RBP10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Ksr2Q3UVC0 959 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Map3k2Q61083 619 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Fkbp5Q64378 456 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 KarsQ99MN1 595 aaKnown RBP10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Gm7347D3YYI9 267 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Speer4aF8VPX6 267 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Gas2l2Q5SSG4 860 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Sv2bQ8BG39 683 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Rasgrp4Q8BTM9 673 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Ccdc30Q8BVF4 654 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Cyp2ab1S4R196 498 aa10.17□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Aplp1Q03157 653 aa10.16□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Vil1Q62468 827 aa10.16□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Zc3h15Q3TIV5 426 aaKnown RBP10.16□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Rad21Q61550 635 aaKnown RBP10.16□□□□□ -0.78
Ssr3-201ENSMUST00000029414 GptQ8QZR5 496 aa10.16□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Cwc25Q9DBF7 416 aa10.16□□□□□ -0.78
Ssr3-201ENSMUST00000029414 EvplQ9D952 2035 aa10.16□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Mybbp1aQ7TPV4 1344 aaKnown RBP10.15□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Cops6O88545 324 aa10.15□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Sf3b3Q921M3 1217 aaKnown RBP10.15□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Cyp7a1Q64505 503 aa10.15□□□□□ -0.78
Ssr3-201ENSMUST00000029414 Cfap44E9Q5M6 1843 aa10.15□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Rbbp6P97868 1790 aaKnown RBP10.15□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Myo3bQ1EG27 1305 aa10.15□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Gm6268A2A3U9 297 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Glg1Q61543 1175 aaKnown RBP10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Clca2Q8BG22 942 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ttc14Q9CSP9 761 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 UvssaQ9D479 717 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 CanxP35564 591 aaKnown RBP10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Igflr1Q3U4N7 345 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Eif4g2Q62448 906 aaKnown RBP10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 4931408C20RikE9PWP9 1381 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Lrch1P62046 709 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Fam213aQ9CYH2 218 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Stard3nlQ9DCI3 235 aa10.14□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Samd1D3YXK1 519 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Exoc6bA6H5Z3 810 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 NmiO35309 314 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Znf219Q6IQX8 726 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Gpr101Q80T62 511 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Znf428Q8C1M2 176 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ccar1Q8CH18 1146 aaKnown RBP10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Upf1Q9EPU0 1124 aaKnown RBP10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Adarb2Q9JI20 745 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ppp1r3fQ9JIG4 799 aa10.13□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Vsig10D3YX43 558 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 PgfP49764 158 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Usp48Q3V0C5 1052 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 HellsQ60848 821 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ripor2Q80U16 1078 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Sde2Q8K1J5 448 aaKnown RBP10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Oas2E9Q9A9 742 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ipo4Q8VI75 1082 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ccdc171E9Q1U1 1324 aa10.12□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Plcb3P51432 1234 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms